RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KLHL40Q2TBA0 621 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 SLC10A6Q3KNW5 377 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
TPM1-214ENST00000558544 RBM43Q6ZSC3 357 aaKnown RBP18.99■□□□□ 0.63
TPM1-214ENST00000558544 ZNF280BQ86YH2 543 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 C12orf56Q8IXR9 622 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 FAM212AQ96EL1 285 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 SEMA6BQ9H3T3 888 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 CERS4Q9HA82 394 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 KANSL3Q9P2N6 904 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 ATG2AQ2TAZ0 1938 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 KIAA0391O15091 583 aaKnown RBP18.98■□□□□ 0.63
TPM1-214ENST00000558544 ZC3H11AO75152 810 aaKnown RBP eCLIP18.98■□□□□ 0.63
TPM1-214ENST00000558544 DDHD2O94830 711 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 NR3C1P04150 777 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 NFKBIBQ15653 356 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 ZCWPW2Q504Y3 356 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 XKR4Q5GH76 650 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 KLHL10Q6JEL2 608 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 ALKAL1Q6UXT8 129 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 XXYLT1Q8NBI6 393 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 CLP1Q92989 425 aaKnown RBP18.98■□□□□ 0.63
TPM1-214ENST00000558544 TGS1Q96RS0 853 aaKnown RBP18.98■□□□□ 0.63
TPM1-214ENST00000558544 NRDE2Q9H7Z3 1164 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 CNTN3Q9P232 1028 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 TRAF3IP3Q9Y228 551 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 TRANK1O15050 2925 aa18.98■□□□□ 0.63
TPM1-214ENST00000558544 TTC26A0AVF1 554 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 TRIM49BA6NDI0 452 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 LACTBL1A8MY62 500 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 PPP1R3GB7ZBB8 358 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 PSMA7O14818 248 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 THP07101 528 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 CTNNB1P35222 781 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 PBX3P40426 434 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 PPP1R2P41236 205 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 SPAG1Q07617 926 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 CBWD2Q8IUF1 395 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
TPM1-214ENST00000558544 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
TPM1-214ENST00000558544 FAM193BQ96PV7 902 aaPredicted RBP18.97■□□□□ 0.63
TPM1-214ENST00000558544 ZNF576Q9H609 170 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 RBAKQ9NYW8 714 aaPredicted RBP18.97■□□□□ 0.63
TPM1-214ENST00000558544 DNAJB4Q9UDY4 337 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 CTNND2Q9UQB3 1225 aa18.97■□□□□ 0.63
TPM1-214ENST00000558544 SMIM28A0A1B0GU29 152 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 TULP1O00294 542 aaPredicted RBP18.96■□□□□ 0.63
TPM1-214ENST00000558544 EXOC3O60645 756 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 LAG3P18627 525 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 FXR1P51114 621 aaKnown RBP eCLIP18.96■□□□□ 0.63
TPM1-214ENST00000558544 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
TPM1-214ENST00000558544 ERVK-21P61565 698 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 NAB2Q15742 525 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 CENPPQ6IPU0 288 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 BRSK2Q8IWQ3 736 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 COLGALT1Q8NBJ5 622 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 RDH13Q8NBN7 331 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 P2RX5Q93086 422 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 DHTKD1Q96HY7 919 aaPredicted RBP18.96■□□□□ 0.63
TPM1-214ENST00000558544 PPP1R10Q96QC0 940 aaKnown RBP18.96■□□□□ 0.63
TPM1-214ENST00000558544 TSG101Q99816 390 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 TTYH1Q9H313 450 aaPredicted RBP18.96■□□□□ 0.63
TPM1-214ENST00000558544 PLEKHA5Q9HAU0 1116 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 RWDD3Q9Y3V2 267 aa18.96■□□□□ 0.63
TPM1-214ENST00000558544 TMEM265A0A087WTH1 108 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 ADRB2P07550 413 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 KCNE1P15382 129 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 NR2F2P24468 414 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 CCNE1P24864 410 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 WNT7BP56706 349 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 BCAR1P56945 870 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 NLRP12P59046 1061 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 DSC1Q08554 894 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 SNRNP35Q16560 246 aaKnown RBP18.95■□□□□ 0.62
TPM1-214ENST00000558544 DPCR1Q3MIW9 517 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 EPC2Q52LR7 807 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 SLC9A9Q8IVB4 645 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 COLGALT2Q8IYK4 626 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 NELFBQ8WX92 580 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 ARNTL2Q8WYA1 636 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 SAMD11Q96NU1 681 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 KIAA1586Q9HCI6 787 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 AAASQ9NRG9 546 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 DMAC2Q9NW81 257 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 CACNG4Q9UBN1 327 aa18.95■□□□□ 0.62
TPM1-214ENST00000558544 CASTOR2A6NHX0 329 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 ZNF233A6NK53 670 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 NT5C1B-RDH14C9J2C7 533 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 BMPR1AP36894 532 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 SLC11A1P49279 550 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 CASP4P49662 377 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 STX17P56962 302 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 POU5F1Q01860 360 aaKnown RBP18.94■□□□□ 0.62
TPM1-214ENST00000558544 PAK1Q13153 545 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 TUSC3Q13454 348 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 NFIL3Q16649 462 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 EDRF1Q3B7T1 1238 aa18.94■□□□□ 0.62
TPM1-214ENST00000558544 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms