RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 CPB2Q96IY4 423 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 ZBTB45Q96K62 511 aaPredicted RBP12.5□□□□□ -0.41
RORA-207ENST00000558234 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 ABHD14A-ACY1A0A1B0GW23 586 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 GTPBP10A4D1E9 387 aaKnown RBP12.5□□□□□ -0.41
RORA-207ENST00000558234 STX10O60499 249 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 RPS6KA5O75582 802 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 LCA5LO95447 670 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 ASTE1Q2TB18 679 aaPredicted RBP12.5□□□□□ -0.41
RORA-207ENST00000558234 ZBTB41Q5SVQ8 909 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 ATF7IP2Q5U623 682 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 REXO1L1PQ8IX06 675 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 MFSD14AQ96MC6 490 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 PPP1R16BQ96T49 567 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 TARS2Q9BW92 718 aaKnown RBP12.5□□□□□ -0.41
RORA-207ENST00000558234 C1orf112Q9NSG2 853 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 CNTN3Q9P232 1028 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 K7ERI5 159 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 N4BP3O15049 544 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 PRPF4BQ13523 1007 aaKnown RBP12.5□□□□□ -0.41
RORA-207ENST00000558234 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 EEF2KMTQ96G04 330 aa12.5□□□□□ -0.41
RORA-207ENST00000558234 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■■■■□ 24.5
RORA-207ENST00000558234 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 TRIM14Q14142 442 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 DCAF4L1Q3SXM0 396 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 NELFCDQ8IXH7 590 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 TMEM192Q8IY95 271 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 KIF20AO95235 890 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 GCNT3O95395 438 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 CASP14P31944 242 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 ADAM9Q13443 819 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 CLLU1OSQ5K130 101 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 NOTUMQ6P988 496 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
RORA-207ENST00000558234 CALUO43852 315 aaPredicted RBP12.49□□□□□ -0.41
RORA-207ENST00000558234 NR2F2P24468 414 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 JAM2P57087 298 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
RORA-207ENST00000558234 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 TRIM44Q96DX7 344 aaPredicted RBP12.49□□□□□ -0.41
RORA-207ENST00000558234 SNX27Q96L92 541 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
RORA-207ENST00000558234 IPPQ9Y573 584 aa12.49□□□□□ -0.41
RORA-207ENST00000558234 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 H0YGN5 161 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 EOMESO95936 686 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 C17orf53Q8N3J3 647 aaPredicted RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 CASD1Q96PB1 797 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 FAM105AQ9NUU6 356 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 NOD1Q9Y239 953 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 CCDC169A6NNP5 214 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 M0QZ92 97 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 DGKIO75912 1065 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 RAB27AP51159 221 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 ADKP55263 362 aaKnown RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 CHMP4BP1P59074 171 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 SLC24A5Q71RS6 500 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 SEPT8Q92599 483 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 EDEM3Q9BZQ6 932 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 PLCB1Q9NQ66 1216 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 REXO2Q9Y3B8 237 aaKnown RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 SCN1AP35498 2009 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 EFCAB14O75071 495 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 FGFR1OPO95684 399 aaKnown RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 KCNE1P15382 129 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 NOLC1Q14978 699 aaKnown RBP eCLIP12.48□□□□□ -0.41
RORA-207ENST00000558234 PSRC1Q6PGN9 363 aaPredicted RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 RAD9BQ6WBX8 426 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 CCAR2Q8N163 923 aaKnown RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 PPP1R10Q96QC0 940 aaKnown RBP12.48□□□□□ -0.41
RORA-207ENST00000558234 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 PTPRJQ12913 1337 aa12.48□□□□□ -0.41
RORA-207ENST00000558234 PTGESO14684 152 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 B4GALT3O60512 393 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
RORA-207ENST00000558234 RAG1P15918 1043 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
RORA-207ENST00000558234 UBXN1Q04323 297 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
RORA-207ENST00000558234 CCDC112Q8NEF3 446 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 TSPAN18Q96SJ8 248 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 SYT11Q9BT88 431 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 NPTXRO95502 500 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 SKILP12757 684 aa12.47□□□□□ -0.41
RORA-207ENST00000558234 DEFB103AP81534 67 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms