RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP3-207ENST00000558218 CHST7Q9NS84 486 aa11.13□□□□□ -0.63
USP3-207ENST00000558218 PARP2Q9UGN5 583 aa11.13□□□□□ -0.63
USP3-207ENST00000558218 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
USP3-207ENST00000558218 TDRD15B5MCY1 1934 aaKnown RBP11.13□□□□□ -0.63
USP3-207ENST00000558218 VWA3AA6NCI4 1184 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 H0YCG3 227 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 B4GALT3O60512 393 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 URODP06132 367 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 THP07101 528 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
USP3-207ENST00000558218 AKAP5P24588 427 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 CDC25AP30304 524 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
USP3-207ENST00000558218 UBA7P41226 1012 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 NPTX2P47972 431 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 SCNN1GP51170 649 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 SMTNP53814 917 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
USP3-207ENST00000558218 DSG1Q02413 1049 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 CREMQ03060 361 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 TUSC3Q13454 348 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 TMEM132AQ24JP5 1023 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 KIAA0319Q5VV43 1072 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 CALML4Q96GE6 196 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 CDK5RAP3Q96JB5 506 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 RIPOR3Q96MK2 946 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 VN1R3Q9BXE9 311 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 FNIP2Q9P278 1114 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 ARHGAP28Q9P2N2 729 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 NR2E1Q9Y466 385 aa11.12□□□□□ -0.63
USP3-207ENST00000558218 CCDC169A6NNP5 214 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 PP2D1A8MPX8 630 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 HIP1RO75146 1068 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 TADA2AO75478 443 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 BRD1O95696 1058 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 ADH1AP07327 375 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 CNPP09543 421 aaKnown RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 PLS3P13797 630 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 KLRC2P26717 231 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 ABCD1P33897 745 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 CA8P35219 290 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 GLUD2P49448 558 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 CLCN4P51793 760 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 PEX3P56589 373 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 USP41Q3LFD5 358 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 NT5DC1Q5TFE4 455 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 KIAA1841Q6NSI8 718 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 LLGL2Q6P1M3 1020 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 PDXDC1Q6P996 788 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 C15orf39Q6ZRI6 1047 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 METTL3Q86U44 580 aaKnown RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 CABP7Q86V35 215 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 CDR2LQ86X02 465 aaPredicted RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 DAW1Q8N136 415 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 CMASQ8NFW8 434 aaPredicted RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 EDAQ92838 391 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 PNMA5Q96PV4 448 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 APOL6Q9BWW8 343 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 MRPL4Q9BYD3 311 aaKnown RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 PTPRHQ9HD43 1115 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 C11orf16Q9NQ32 467 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 TOPORSQ9NS56 1045 aaPredicted RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 LARSQ9P2J5 1176 aaKnown RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 ADAM28Q9UKQ2 775 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
USP3-207ENST00000558218 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
USP3-207ENST00000558218 MUC3AQ02505 3323 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 PAPLNO95428 1278 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 PLA2G4BP0C869 781 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 MCF2P10911 925 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 GRM5P41594 1212 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 SLC12A3P55017 1021 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 STRN3Q13033 797 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 MAPK7Q13164 816 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 HSP90AA2PQ14568 343 aaPredicted RBP11.1□□□□□ -0.63
USP3-207ENST00000558218 TMEM119Q4V9L6 283 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 XKR4Q5GH76 650 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 FUT10Q6P4F1 479 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 ZPBP2Q6X784 338 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 BMP8AQ7Z5Y6 402 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 GPR149Q86SP6 731 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 AUTS2Q8WXX7 1259 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 FBXL18Q96ME1 805 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 UROC1Q96N76 676 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 RUSC1Q9BVN2 902 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 CCSER1Q9C0I3 900 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 SFXN1Q9H9B4 322 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 KLK14Q9P0G3 267 aa11.1□□□□□ -0.63
USP3-207ENST00000558218 ODF2LQ9ULJ1 636 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms