RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 ECHDC2Q86YB7 292 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 DAW1Q8N136 415 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 EPS8L1Q8TE68 723 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 KREMEN1Q96MU8 473 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 ADAM22Q9P0K1 906 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 ARFGEF1Q9Y6D6 1849 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 SUN1O94901 812 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 CFHP08603 1231 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 RRM1P23921 792 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 OVGP1Q12889 678 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 OTOP1Q7RTM1 612 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 VSIG1Q86XK7 387 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 LMO3Q8TAP4 145 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 ZC3H12CQ9C0D7 883 aaKnown RBP13.19□□□□□ -0.3
LDLR-205ENST00000557933 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
LDLR-205ENST00000557933 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 INTUQ9ULD6 942 aa13.19□□□□□ -0.3
LDLR-205ENST00000557933 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 CCDC189A1A4V9 331 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 SLC16A3O15427 465 aaKnown RBP13.18□□□□□ -0.3
LDLR-205ENST00000557933 RARGP13631 454 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 SIX1Q15475 284 aaPredicted RBP13.18□□□□□ -0.3
LDLR-205ENST00000557933 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 TAOK1Q7L7X3 1001 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 EIF1ADQ8N9N8 165 aaKnown RBP13.18□□□□□ -0.3
LDLR-205ENST00000557933 POMGNT1Q8WZA1 660 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 UTP4Q969X6 686 aaKnown RBP13.18□□□□□ -0.3
LDLR-205ENST00000557933 METTL5Q9NRN9 209 aaKnown RBP13.18□□□□□ -0.3
LDLR-205ENST00000557933 HOMER3Q9NSC5 361 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 RASA4BC9J798 803 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 RASA4O43374 803 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 ADRB2P07550 413 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 GHRP10912 638 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 KRT10P13645 584 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 NOVP48745 357 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 NPEPPSP55786 919 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 DGKZQ13574 1117 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 ANKRD20A2Q5SQ80 823 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 ANKRD20A1Q5TYW2 823 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 ANKRD20A3Q5VUR7 823 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 DCTN4Q9UJW0 460 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
LDLR-205ENST00000557933 PPEF1O14829 653 aaPredicted RBP13.17□□□□□ -0.3
LDLR-205ENST00000557933 ENTPD5O75356 428 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 BCRP11274 1271 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 TCF4P15884 667 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 GM2AP17900 193 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 VAMP7P51809 220 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 ITIH4Q14624 930 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 PLA2G4FQ68DD2 849 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 GSTA5Q7RTV2 222 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 ART4Q93070 314 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
LDLR-205ENST00000557933 ZNF577Q9BSK1 485 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 TMEM117Q9H0C3 514 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 MYLK2Q9H1R3 596 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 TDRD3Q9H7E2 651 aaKnown RBP13.17□□□□□ -0.3
LDLR-205ENST00000557933 NOP53Q9NZM5 478 aaKnown RBP13.17□□□□□ -0.3
LDLR-205ENST00000557933 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 FRMPD4Q14CM0 1322 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 IGLV3-22A0A075B6J6 115 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 CTNNA2P26232 953 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 EPHB2P29323 1055 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 SREBF1P36956 1147 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 ABL2P42684 1182 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 MXI1P50539 228 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 PEX3P56589 373 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 FMO1Q01740 532 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 TAF11Q15544 211 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 TAS1R2Q8TE23 839 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 ZBTB10Q96DT7 871 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 NINJ2Q9NZG7 142 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
LDLR-205ENST00000557933 CYP3A7-CYP3A51PA0A087WV96 503 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 RALAP11233 206 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 TUBP50607 506 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 SCARA3Q6AZY7 606 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 C3orf20Q8ND61 904 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 CENPTQ96BT3 561 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 PRR12Q9ULL5 1215 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 MYH11P35749 1972 aa13.16□□□□□ -0.3
LDLR-205ENST00000557933 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms