RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 EXOC3L4Q17RC7 722 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CBWD6Q4V339 395 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CBWD3Q5JTY5 395 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 DNTTIP2Q5QJE6 756 aaKnown RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 CBWD5Q5RIA9 395 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 KLHDC7AQ5VTJ3 777 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 RRAGAQ7L523 313 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 XXYLT1Q8NBI6 393 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 NEK11Q8NG66 645 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 PPTC7Q8NI37 304 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 TRAPPC12Q8WVT3 735 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 SLC7A3Q8WY07 619 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 IQCDQ96DY2 449 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 HAPLN2Q9GZV7 340 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 ALG2Q9H553 416 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 GPAMQ9HCL2 828 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 PLCB1Q9NQ66 1216 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CEP72Q9P209 647 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 ARHGAP20Q9P2F6 1191 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 PLAGL2Q9UPG8 496 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 FRMD4BQ9Y2L6 1034 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 PPME1Q9Y570 386 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 EPN1Q9Y6I3 576 aaPredicted RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 KIAA1217Q5T5P2 1943 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 GTPBP10A4D1E9 387 aaKnown RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZNF263O14978 683 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 CCP110O43303 1012 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZSCAN12O43309 604 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ADCY3O60266 1144 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 HBP1O60381 514 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 NDUFA10O95299 355 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 PIGRP01833 764 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 GJB1P08034 283 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 MX2P20592 715 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 TM4SF4P48230 202 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 FMO5P49326 533 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 SLC26A2P50443 739 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 VAMP7P51809 220 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 INHBEP58166 350 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 BFSP1Q12934 665 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 CRHR2Q13324 411 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 PPP2R5AQ15172 486 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 CCL14Q16627 93 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ASTE1Q2TB18 679 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 DUSP28Q4G0W2 176 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 BRDTQ58F21 947 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 TCERG1LQ5VWI1 586 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 IER5Q5VY09 327 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 HGSNATQ68CP4 663 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 IQSEC1Q6DN90 963 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 GJB7Q6PEY0 223 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 GBP6Q6ZN66 633 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 CBWD2Q8IUF1 395 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 PGBD3Q8N328 593 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 LRRC71Q8N4P6 559 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 MSL3Q8N5Y2 521 aaKnown RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 LINC01465Q8N7H1 131 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZNF397Q8NF99 534 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 LMO3Q8TAP4 145 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 DEPTORQ8TB45 409 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 PRPF31Q8WWY3 499 aaKnown RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 SAAL1Q96ER3 474 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZBTB45Q96K62 511 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 MFSD14AQ96MC6 490 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 C16orf70Q9BSU1 422 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ABHD16BQ9H3Z7 469 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 NHEJ1Q9H9Q4 299 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZFYVE28Q9HCC9 887 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 NLRC4Q9NPP4 1024 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.13
SPG11-204ENST00000557866 EXOC7Q9UPT5 735 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 FHOD1Q9Y613 1164 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 STYXL1Q9Y6J8 313 aa8.02□□□□□ -1.13
SPG11-204ENST00000557866 DOCK5Q9H7D0 1870 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 LRRIQ4A6NIV6 560 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 H0YCG3 227 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 LRRN2O75325 713 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 C22orf31O95567 290 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 STAU1O95793 577 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 MMP3P08254 477 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 CCDC175P0C221 793 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 ZNF286BP0CG31 522 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 KRT13P13646 458 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 INSRRP14616 1297 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 UCHL3P15374 230 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 CYP2B6P20813 491 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 GARTP22102 1010 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 MSX1P28360 303 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 EIF4A3P38919 411 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 JAM2P57087 298 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 ETF1P62495 437 aaKnown RBP8.01□□□□□ -1.13
SPG11-204ENST00000557866 CAP1Q01518 475 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 CYP24A1Q07973 514 aa8.01□□□□□ -1.13
SPG11-204ENST00000557866 LAMTOR4Q0VGL1 99 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms