RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 GPR182O15218 404 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ZC3H11AO75152 810 aaKnown RBP eCLIP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 TRIM49P0CI25 452 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 TRIM49CP0CI26 452 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 PON1P27169 355 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 KRT9P35527 623 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 GRM5P41594 1212 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 KCNJ6P48051 423 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ACOT2P49753 483 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 DLG4P78352 724 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 PPP3CAQ08209 521 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 EEF1DP3Q658K8 133 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 CACNA2D4Q7Z3S7 1137 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 NT5DC4Q86YG4 428 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 WDR49Q8IV35 697 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ZSWIM2Q8NEG5 633 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 CPLX3Q8WVH0 158 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 SYN2Q92777 582 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 CCDC127Q96BQ5 260 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 DNAJC7Q99615 494 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 LSM14BQ9BX40 385 aaKnown RBP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 SENP6Q9GZR1 1112 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ASB7Q9H672 318 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 PLEKHA5Q9HAU0 1116 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 CDHR5Q9HBB8 845 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 AGPAT5Q9NUQ2 364 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 GCNT4Q9P109 453 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 CDY2AQ9Y6F7 541 aa11.1□□□□□ -0.63
GABRB3-212ENST00000557641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
GABRB3-212ENST00000557641 MROH7Q68CQ1 1323 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 B4GALT4O60513 344 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CSDE1O75534 798 aaKnown RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 RPS6KA5O75582 802 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 ZMYND10O75800 440 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 SGPL1O95470 568 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 STAG3L1P0CL83 205 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 HARSP12081 509 aaKnown RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 SKILP12757 684 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 TNNI1P19237 187 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 FECHP22830 423 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 HOXA11P31270 313 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 HNRNPH3P31942 346 aaKnown RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 THPOP40225 353 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 GCLMP48507 274 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CDK7P50613 346 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 ADKP55263 362 aaKnown RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 MGAT3Q09327 533 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 MTFR1Q15390 333 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 TRIM71Q2Q1W2 868 aaKnown RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CBWD6Q4V339 395 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CBWD3Q5JTY5 395 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CBWD5Q5RIA9 395 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 TRIM65Q6PJ69 517 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 TMTC1Q8IUR5 882 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 FBXL13Q8NEE6 735 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CAGE1Q8TC20 777 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 PPP1R13LQ8WUF5 828 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 BAG1Q99933 345 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CRACR2AQ9BSW2 395 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 INTS2Q9H0H0 1204 aaKnown RBP11.09□□□□□ -0.63
GABRB3-212ENST00000557641 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 ABHD10Q9NUJ1 306 aa11.09□□□□□ -0.63
GABRB3-212ENST00000557641 TLR3O15455 904 aaKnown RBP11.08□□□□□ -0.64
GABRB3-212ENST00000557641 ARHGAP6O43182 974 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 DLATP10515 647 aaKnown RBP11.08□□□□□ -0.64
GABRB3-212ENST00000557641 UCHL3P15374 230 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 SLC9A1P19634 815 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 MSNP26038 577 aaKnown RBP11.08□□□□□ -0.64
GABRB3-212ENST00000557641 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-212ENST00000557641 KLK7P49862 253 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 LBX1P52954 281 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
GABRB3-212ENST00000557641 CDK17Q00537 523 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 BFSP2Q13515 415 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 DUOXA2Q1HG44 320 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 ZACNQ401N2 412 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 SV2AQ7L0J3 742 aa11.08□□□□□ -0.64
GABRB3-212ENST00000557641 TMEM40Q8WWA1 233 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms