RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 MSANTD3Q96H12 275 aa11.59□□□□□ -0.55
TRAV33-201ENST00000557514 PAAF1Q9BRP4 392 aa11.59□□□□□ -0.55
TRAV33-201ENST00000557514 TEKT3Q9BXF9 490 aa11.59□□□□□ -0.55
TRAV33-201ENST00000557514 NXF3Q9H4D5 531 aaKnown RBP11.59□□□□□ -0.55
TRAV33-201ENST00000557514 RBM28Q9NW13 759 aaKnown RBP11.59□□□□□ -0.55
TRAV33-201ENST00000557514 C2orf42Q9NWW7 574 aa11.59□□□□□ -0.55
TRAV33-201ENST00000557514 CACNG4Q9UBN1 327 aa11.59□□□□□ -0.55
TRAV33-201ENST00000557514 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
TRAV33-201ENST00000557514 COL4A2P08572 1712 aa11.59□□□□□ -0.55
TRAV33-201ENST00000557514 AXIN1O15169 862 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 EDIL3O43854 480 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 TADA2AO75478 443 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PSMD10O75832 226 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 ERLIN2O94905 339 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 KIF4AO95239 1232 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 MPLP40238 635 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 MLLT6P55198 1093 aaPredicted RBP11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PCBP1Q15365 356 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PRSS36Q5K4E3 855 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 FAM171A1Q5VUB5 890 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PLA2G4FQ68DD2 849 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 RNF43Q68DV7 783 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 B4GALNT3Q6L9W6 998 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PDXDC1Q6P996 788 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 C1orf228Q6PIY5 440 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 APOA5Q6Q788 366 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 VITQ6UXI7 678 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 GAB3Q8WWW8 586 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PRPF31Q8WWY3 499 aaKnown RBP11.58□□□□□ -0.56
TRAV33-201ENST00000557514 PSPC1Q8WXF1 523 aaKnown RBP11.58□□□□□ -0.56
TRAV33-201ENST00000557514 SLC7A3Q8WY07 619 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 ASB16Q96NS5 453 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 ZMYND12Q9H0C1 365 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 SMOC1Q9H4F8 434 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 ZFP14Q9HCL3 533 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 RBM12Q9NTZ6 932 aaKnown RBP11.58□□□□□ -0.56
TRAV33-201ENST00000557514 RBM8AQ9Y5S9 174 aaKnown RBP11.58□□□□□ -0.56
TRAV33-201ENST00000557514 NCANO14594 1321 aa11.58□□□□□ -0.56
TRAV33-201ENST00000557514 SGSM2O43147 1006 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 TOP3BO95985 862 aaKnown RBP11.57□□□□□ -0.56
TRAV33-201ENST00000557514 SRGAP2CP0DJJ0 459 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 GSPT1P15170 499 aaKnown RBP11.57□□□□□ -0.56
TRAV33-201ENST00000557514 PSMC3P17980 439 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 CCNE1P24864 410 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 AXLP30530 894 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 GDI1P31150 447 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 HOXC13P31276 330 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 LAMTOR4Q0VGL1 99 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 RTN1Q16799 776 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 TCEAL6Q6IPX3 200 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 MIER3Q7Z3K6 550 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 CACNA2D4Q7Z3S7 1137 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 KBTBD6Q86V97 674 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 TCEAL3Q969E4 200 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 GJA10Q969M2 543 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 EDEM2Q9BV94 578 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 LRRC2Q9BYS8 371 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 DHX33Q9H6R0 707 aaKnown RBP11.57□□□□□ -0.56
TRAV33-201ENST00000557514 VPS45Q9NRW7 570 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 DOCK6Q96HP0 2047 aa11.57□□□□□ -0.56
TRAV33-201ENST00000557514 CCDC163A0A0D9SF12 145 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 ARHGEF37A1IGU5 675 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 WDR27A2RRH5 827 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 DDX11L8A8MPP1 907 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 RPP40O75818 363 aaKnown RBP11.56□□□□□ -0.56
TRAV33-201ENST00000557514 MICAL2O94851 1124 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 CHMLP26374 656 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 ELAVL2Q12926 359 aaKnown RBP11.56□□□□□ -0.56
TRAV33-201ENST00000557514 TUSC3Q13454 348 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 AMHR2Q16671 573 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 PFKFB3Q16875 520 aaPredicted RBP11.56□□□□□ -0.56
TRAV33-201ENST00000557514 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
TRAV33-201ENST00000557514 CEP57Q86XR8 500 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 RNF149Q8NC42 400 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 TMEM143Q96AN5 459 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 SCNM1Q9BWG6 230 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 SDK1Q7Z5N4 2213 aa11.56□□□□□ -0.56
TRAV33-201ENST00000557514 CASTOR2A6NHX0 329 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 AKAP3O75969 853 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 AKAP5P24588 427 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 OR1D2P34982 312 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 CCR2P41597 374 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
TRAV33-201ENST00000557514 NPEPPSP55786 919 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 PSMC5P62195 406 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 CCINQ13939 588 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 SOWAHCQ53LP3 525 aaPredicted RBP11.55□□□□□ -0.56
TRAV33-201ENST00000557514 DGKKQ5KSL6 1271 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 SH3PXD2AQ5TCZ1 1133 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 FERMT3Q86UX7 667 aa11.55□□□□□ -0.56
TRAV33-201ENST00000557514 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms