RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 CLEC1BQ9P126 229 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 CLIP2Q9UDT6 1046 aa5.59□□□□□ -1.51
SCFD1-223ENST00000557076 DBNLQ9UJU6 430 aaKnown RBP5.59□□□□□ -1.51
SCFD1-223ENST00000557076 EMSYQ7Z589 1322 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 TCRBV5S4A2TA0A5A2 114 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 GRM6O15303 877 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 TBX10O75333 385 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 BPNT1O95861 308 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 GNAI2P04899 355 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 PDE6AP16499 860 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 CLCN5P51795 746 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 CAMK1Q14012 370 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 PTPN21Q16825 1174 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
SCFD1-223ENST00000557076 PLEKHG4Q58EX7 1191 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 TMEM201Q5SNT2 666 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF618Q5T7W0 954 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 AMOTL1Q8IY63 956 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 UBALD2Q8IYN6 164 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 EFHBQ8N7U6 833 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 ANKS4BQ8N8V4 417 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 DBF4BQ8NFT6 615 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 STAG1Q8WVM7 1258 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 PPP2R3CQ969Q6 453 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 EAF2Q96CJ1 260 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-223ENST00000557076 IL17RAQ96F46 866 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 INTS4Q96HW7 963 aaKnown RBP5.58□□□□□ -1.52
SCFD1-223ENST00000557076 YME1L1Q96TA2 773 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 RNF146Q9NTX7 359 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 ADD3Q9UEY8 706 aaKnown RBP5.58□□□□□ -1.52
SCFD1-223ENST00000557076 NOP58Q9Y2X3 529 aaKnown RBP5.58□□□□□ -1.52
SCFD1-223ENST00000557076 RWDD3Q9Y3V2 267 aa5.58□□□□□ -1.52
SCFD1-223ENST00000557076 DDX49Q9Y6V7 483 aaKnown RBP5.58□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF532Q9HCE3 1301 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 IGKV6D-41A0A0C4DH26 115 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 PATL2C9JE40 543 aaKnown RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 PRKAB2O43741 272 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 SURF6O75683 361 aaKnown RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 CT47B1P0C2W7 299 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 LINC00271P0C7V0 271 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 CASTP20810 708 aaKnown RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 GTF2F1P35269 517 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 NDUFV1P49821 464 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 ST13P50502 369 aaKnown RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 DLG4P78352 724 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 NAALADL2Q58DX5 795 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 CTR9Q6PD62 1173 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF605Q86T29 641 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 FAM160B2Q86V87 743 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 LCORLQ8N3X6 602 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 FIBCD1Q8N539 461 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 TMEM105Q8N8V8 129 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 GMCL1P1Q8NEA9 526 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 BAHD1Q8TBE0 780 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 SSH3Q8TE77 659 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 SCFD2Q8WU76 684 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 SUSD6Q92537 303 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 KAT2BQ92831 832 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 RPGRIP1Q96KN7 1286 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 DUSP9Q99956 384 aaKnown RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 ASPNQ9BXN1 380 aa5.57□□□□□ -1.52
SCFD1-223ENST00000557076 CCDC8Q9H0W5 538 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 USP15Q9Y4E8 981 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-223ENST00000557076 GPR179Q6PRD1 2367 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 OTOGLQ3ZCN5 2332 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 CYP2D7A0A087X1C5 515 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 TEX51A0A1B0GUA7 166 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 RSPH10B2B2RC85 870 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 B4DLN1 442 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 TMEM232C9JQI7 657 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 E9PSI1 815 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 RBAK-RBAKDNI3L0D1 243 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 LINC01565O15544 149 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 TTLL1O95922 423 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 PDGFBP01127 241 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 LMNAP02545 664 aaKnown RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 RSPH10BP0C881 870 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 TXNP10599 105 aaKnown RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 ALAS1P13196 640 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 EDNRBP24530 442 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 ALDH5A1P51649 535 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 STAT2P52630 851 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 MRPL12P52815 198 aaKnown RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 OS9Q13438 667 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 BAATQ14032 418 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 PPP2R5BQ15173 497 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 MUM1L1Q5H9M0 696 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 MEI1Q5TIA1 1274 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 CCDC62Q6P9F0 684 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 C7orf31Q8N865 590 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 PHC3Q8NDX5 983 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 AFG1LQ8WV93 481 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 SEPT8Q92599 483 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 P2RX5Q93086 422 aa5.56□□□□□ -1.52
SCFD1-223ENST00000557076 MPHOSPH6Q99547 160 aaKnown RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 ZNF552Q9H707 407 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-223ENST00000557076 INCENPQ9NQS7 918 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms