RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 MTA2O94776 668 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 TTC4O95801 387 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 IVDP26440 423 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 STX2P32856 288 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 RHBDF2Q6PJF5 856 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 CRELD2Q6UXH1 353 aaPredicted RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 FAM47EQ6ZV65 393 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 CBWD2Q8IUF1 395 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 KCTD17Q8N5Z5 321 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 MORC4Q8TE76 937 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 RSRC1Q96IZ7 334 aaKnown RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 PAIP2Q9BPZ3 127 aaKnown RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 TOPORSQ9NS56 1045 aaPredicted RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 WHRNQ9P202 907 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 ANAPC7Q9UJX3 599 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 R3HDM2Q9Y2K5 976 aaKnown RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 C15orf41Q9Y2V0 281 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 FSCN2O14926 492 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 ADCY8P40145 1251 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 ERICH1Q86X53 443 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 C12orf50Q8NA57 414 aaPredicted RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 SNF8Q96H20 258 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 C9orf72Q96LT7 481 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 NINJ2Q9NZG7 142 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
SRP54-213ENST00000556994 GTF3C4Q9UKN8 822 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
SRP54-213ENST00000556994 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 O00370 1275 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
SRP54-213ENST00000556994 ITIH2P19823 946 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 MAPK4P31152 587 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 GRIPAP1Q4V328 841 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 TMEM206Q9H813 350 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 ANAPC5Q9UJX4 755 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 LTBP1Q14766 1721 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 GJB6O95452 261 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 KRT5P13647 590 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 MSH2P43246 934 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 PSEN1P49768 467 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 MFAP3P55082 362 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 PEX3P56589 373 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 CDR2Q01850 454 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 CRYMQ14894 314 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 SHC3Q92529 594 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 PI4K2AQ9BTU6 479 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 KIFC3Q9BVG8 833 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 IDI2Q9BXS1 227 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
SRP54-213ENST00000556994 PRKAG3Q9UGI9 489 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
SRP54-213ENST00000556994 P4HA2O15460 535 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 GRIN3BO60391 1043 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 TOM1O60784 492 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 VIL1P09327 827 aaKnown RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 ALADP13716 330 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ATF2P15336 505 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ITGB5P18084 799 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 FOXN2P32314 431 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 HP1BP3Q5SSJ5 553 aaPredicted RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 TAS1R2Q8TE23 839 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 CSRNP1Q96S65 589 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ARHGEF3Q9NR81 526 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 NOP53Q9NZM5 478 aaKnown RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 UVRAGQ9P2Y5 699 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 EIF4E1BA6NMX2 242 aaKnown RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 SPAG7O75391 227 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 NEBLO76041 1014 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 PLS3P13797 630 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 RRM1P23921 792 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ATP5DP30049 168 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ADSSP30520 456 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 GJC1P36383 396 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 MYBPC2Q14324 1141 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 SNRNP35Q16560 246 aaKnown RBP12.15□□□□□ -0.46
SRP54-213ENST00000556994 ACAD10Q6JQN1 1059 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 B3GNT9Q6UX72 402 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 ECHDC2Q86YB7 292 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
SRP54-213ENST00000556994 DDX1Q92499 740 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms