RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 TLE3Q04726 772 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 USP41Q3LFD5 358 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 USP39Q53GS9 565 aaKnown RBP13.77□□□□□ -0.21
ABCD4-226ENST00000556971 AXDND1Q5T1B0 1012 aaPredicted RBP13.77□□□□□ -0.21
ABCD4-226ENST00000556971 FUT10Q6P4F1 479 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 MFSD6LQ8IWD5 586 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 YAF2Q8IY57 180 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
ABCD4-226ENST00000556971 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 MED8Q96G25 268 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 GTSE1Q9NYZ3 720 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 ZFHX3Q15911 3703 aa13.77□□□□□ -0.21
ABCD4-226ENST00000556971 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 PLK4O00444 970 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 RNF40O75150 1001 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 SKIP12755 728 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 PTGER3P43115 390 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
ABCD4-226ENST00000556971 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 BAP1Q92560 729 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 KIF2CQ99661 725 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 FAM117AQ9C073 453 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 SLC9A2Q9UBY0 812 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 EBF1Q9UH73 591 aa13.76□□□□□ -0.21
ABCD4-226ENST00000556971 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
ABCD4-226ENST00000556971 ADAM12O43184 909 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 ACTR2P61160 394 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 C2orf27AQ580R0 203 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 GLRX5Q86SX6 157 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 RSPRY1Q96DX4 576 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 MAP7D2Q96T17 732 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
ABCD4-226ENST00000556971 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 RSAD1Q9HA92 442 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
ABCD4-226ENST00000556971 KIAA1522Q9P206 1035 aaPredicted RBP13.75□□□□□ -0.21
ABCD4-226ENST00000556971 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
ABCD4-226ENST00000556971 PCNX1Q96RV3 2341 aa13.75□□□□□ -0.21
ABCD4-226ENST00000556971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 GOLGA8CPA6NN73 597 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 TNFRSF10BO14763 440 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 CHADO15335 359 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 TRIM27P14373 513 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 ITGB5P18084 799 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 CCDC173Q0VFZ6 552 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 NFATC3Q12968 1075 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 KRTAP21-3Q3LHN1 58 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 ZNF484Q5JVG2 852 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 GPR65Q8IYL9 337 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 ZSCAN18Q8TBC5 510 aaPredicted RBP13.74□□□□□ -0.21
ABCD4-226ENST00000556971 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 ZFYVE19Q96K21 471 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 TMEM209Q96SK2 561 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 TRAIPQ9BWF2 469 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 AVENQ9NQS1 362 aaPredicted RBP13.74□□□□□ -0.21
ABCD4-226ENST00000556971 TOR4AQ9NXH8 423 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 SNTG2Q9NY99 539 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 SLC6A14Q9UN76 642 aa13.74□□□□□ -0.21
ABCD4-226ENST00000556971 F8P00451 2351 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 HELZP42694 1942 aaKnown RBP13.73□□□□□ -0.21
ABCD4-226ENST00000556971 CCR2P41597 374 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 RAB27AP51159 221 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 MTMR1Q13613 665 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 DMC1Q14565 340 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 PKDCCQ504Y2 493 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 LPCAT2Q7L5N7 544 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 SPACA3Q8IXA5 215 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 LRRC71Q8N4P6 559 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 KBTBD3Q8NAB2 608 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 PNMA1Q8ND90 353 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 TTC9Q92623 222 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 TTC14Q96N46 770 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 CORO1BQ9BR76 489 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 KANSL3Q9P2N6 904 aa13.73□□□□□ -0.21
ABCD4-226ENST00000556971 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
ABCD4-226ENST00000556971 ZBTB5O15062 677 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 FOXP2O15409 715 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 CBFA2T3O75081 653 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 ATXN1LP0C7T5 689 aaKnown RBP13.72□□□□□ -0.21
ABCD4-226ENST00000556971 ITPKAP23677 461 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 SLC26A2P50443 739 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 GPC3P51654 580 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 PSMD5Q16401 504 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 PREPLQ4J6C6 727 aaPredicted RBP13.72□□□□□ -0.21
ABCD4-226ENST00000556971 ARHGAP40Q5TG30 622 aa13.72□□□□□ -0.21
ABCD4-226ENST00000556971 LYSMD4Q5XG99 296 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms