RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 GOLGA8JA6NMD2 632 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 C5orf67F2Z3F1 127 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 LPXNO60711 386 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 CSPG5O95196 566 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 CLTAP09496 248 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 SLC11A1P49279 550 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 SPAG1Q07617 926 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 GPM6BQ13491 265 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 ENOX2Q16206 610 aaKnown RBP19.06■□□□□ 0.64
SHMT2-225ENST00000556798 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
SHMT2-225ENST00000556798 ISM2Q6H9L7 571 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 SPATA20Q8TB22 786 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 GPT2Q8TD30 523 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 GSDMAQ96QA5 445 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 PLVAPQ9BX97 442 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 AGPAT3Q9NRZ7 376 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 CPSF3Q9UKF6 684 aaKnown RBP19.06■□□□□ 0.64
SHMT2-225ENST00000556798 MYO7AQ13402 2215 aa19.06■□□□□ 0.64
SHMT2-225ENST00000556798 PRRC2BQ5JSZ5 2229 aaKnown RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 H3BNC9 293 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 CLIC2O15247 247 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 RB1P06400 928 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 GALTP07902 379 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 GARTP22102 1010 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 DSC1Q08554 894 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 ADGRE1Q14246 886 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 ALKAL1Q6UXT8 129 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 TMEM173Q86WV6 379 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 COLGALT2Q8IYK4 626 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 RABGGTAQ92696 567 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 FAM212AQ96EL1 285 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 ZMAT2Q96NC0 199 aaKnown RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 FAM213AQ9BRX8 229 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 C11orf84Q9BUA3 381 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 RPF1Q9H9Y2 349 aaKnown RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 ALG13Q9NP73 1137 aaKnown RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 MAN1B1Q9UKM7 699 aa19.05■□□□□ 0.64
SHMT2-225ENST00000556798 PRG3Q9Y2Y8 225 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-225ENST00000556798 SMIM28A0A1B0GU29 152 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 CASTOR2A6NHX0 329 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 BIN1O00499 593 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 GRM6O15303 877 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 ITGB1P05556 798 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 THP07101 528 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 OR1G1P47890 313 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 ALDH7A1P49419 539 aaKnown RBP19.04■□□□□ 0.64
SHMT2-225ENST00000556798 PPP2R3AQ06190 1150 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 NAB2Q15742 525 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 KYAT1Q16773 422 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 XKR4Q5GH76 650 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 ZNF658Q5TYW1 1059 aaPredicted RBP19.04■□□□□ 0.64
SHMT2-225ENST00000556798 CRELD2Q6UXH1 353 aaPredicted RBP19.04■□□□□ 0.64
SHMT2-225ENST00000556798 HS2ST1Q7LGA3 356 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 SLC39A11Q8N1S5 342 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 BCL7CQ8WUZ0 217 aaPredicted RBP19.04■□□□□ 0.64
SHMT2-225ENST00000556798 P2RX5Q93086 422 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 PPP1R10Q96QC0 940 aaKnown RBP19.04■□□□□ 0.64
SHMT2-225ENST00000556798 TMEM175Q9BSA9 504 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 CLSTN2Q9H4D0 955 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 HSPBP1Q9NZL4 362 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 CNTN3Q9P232 1028 aa19.04■□□□□ 0.64
SHMT2-225ENST00000556798 TTC26A0AVF1 554 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 LACTBL1A8MY62 500 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 F8W810 466 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 TULP1O00294 542 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-225ENST00000556798 FGF18O76093 207 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 IGFBP4P22692 258 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 CYP2J2P51589 502 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 SOX4Q06945 474 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-225ENST00000556798 TUSC3Q13454 348 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 GPD1LQ8N335 351 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 TMEM130Q8N3G9 435 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 C18orf25Q96B23 403 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-225ENST00000556798 GAS2L1Q99501 681 aaPredicted RBP19.03■□□□□ 0.64
SHMT2-225ENST00000556798 PAAF1Q9BRP4 392 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 KCTD10Q9H3F6 313 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 GOLGA2P5Q9HBQ8 144 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 MARCH5Q9NX47 278 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 SPG21Q9NZD8 308 aa19.03■□□□□ 0.64
SHMT2-225ENST00000556798 NRP1O14786 923 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 EXTL3O43909 919 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 KCNE1P15382 129 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 DNAJB1P25685 340 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 PPM1AP35813 382 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 WNT7BP56706 349 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 GUF1Q8N442 669 aaKnown RBP19.02■□□□□ 0.64
SHMT2-225ENST00000556798 SPPL3Q8TCT6 385 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 NUP62CLQ9H1M0 184 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 PLEKHA5Q9HAU0 1116 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 TUBGCP4Q9UGJ1 667 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 FAN1Q9Y2M0 1017 aa19.02■□□□□ 0.64
SHMT2-225ENST00000556798 VWA8A3KMH1 1905 aa19.02■□□□□ 0.63
SHMT2-225ENST00000556798 KIF20AO95235 890 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 ALDH2P05091 517 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 NFICP08651 508 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 FOSL2P15408 326 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 MCM4P33991 863 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 PRCPP42785 496 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 CBWD2Q8IUF1 395 aa19.01■□□□□ 0.63
SHMT2-225ENST00000556798 BRSK2Q8IWQ3 736 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms