RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TIGD7Q6NT04 549 aaPredicted RBP5.54□□□□□ -1.52
PRPF39-210ENST00000556718 SYCE2Q6PIF2 218 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 ESPNLQ6ZVH7 1005 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 GLCCI1Q86VQ1 547 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 CERS3Q8IU89 383 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 C7orf31Q8N865 590 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 AIFM3Q96NN9 605 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 ENKD1Q9H0I2 346 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 ZMAT4Q9H898 229 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 DNAJC28Q9NX36 388 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 ANKFY1Q9P2R3 1169 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 MSRAQ9UJ68 235 aa5.54□□□□□ -1.52
PRPF39-210ENST00000556718 VSTM5A8MXK1 200 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 FZD9O00144 591 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 TRIM24O15164 1050 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 HOXA3O43365 443 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 EIF3JO75822 258 aaKnown RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 HSPA6P17066 643 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 LAG3P18627 525 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 GPR3P46089 330 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 STRIP1Q5VSL9 837 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 PHYKPLQ8IUZ5 450 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 CMTR2Q8IYT2 770 aaKnown RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 LILRA3Q8N6C8 439 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 RPGRQ92834 1020 aaKnown RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 PMM1Q92871 262 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 FAM193BQ96PV7 902 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 CPPED1Q9BRF8 314 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 PITHD1Q9GZP4 211 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 KCNH6Q9H252 994 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 CYP4F11Q9HBI6 524 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 CCM2LQ9NUG4 571 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 OBP2AQ9NY56 170 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 EIF2B4Q9UI10 523 aaKnown RBP5.53□□□□□ -1.52
PRPF39-210ENST00000556718 COMMD10Q9Y6G5 202 aa5.53□□□□□ -1.52
PRPF39-210ENST00000556718 A0A0A6YYJ9 748 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 ST20-MTHFSA0A0A6YYL1 179 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 MTSS1O43312 755 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 PRPF3O43395 683 aaKnown RBP5.52□□□□□ -1.53
PRPF39-210ENST00000556718 RECQL4O94761 1208 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 MTHFD2P13995 350 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 ENPP1P22413 925 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 APOBEC3AP31941 199 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-210ENST00000556718 BCAR1P56945 870 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 UGT8Q16880 541 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 ARHGAP29Q52LW3 1261 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 ESRP1Q6NXG1 681 aaKnown RBP5.52□□□□□ -1.53
PRPF39-210ENST00000556718 UNQ6494/PRO21346Q6UXR6 183 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 KANSL1Q7Z3B3 1105 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 EXOC8Q8IYI6 725 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 MIER2Q8N344 545 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 PIK3C3Q8NEB9 887 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 TGFBRAP1Q8WUH2 860 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 RTF1Q92541 710 aaKnown RBP5.52□□□□□ -1.53
PRPF39-210ENST00000556718 FERMT2Q96AC1 680 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 LRGUKQ96M69 825 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 UIMC1Q96RL1 719 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 RPS6KC1Q96S38 1066 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 WDR11Q9BZH6 1224 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 R3HDMLQ9H3Y0 253 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 MTG2Q9H4K7 406 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 NMRK2Q9NPI5 230 aa5.52□□□□□ -1.53
PRPF39-210ENST00000556718 NBPF7P0C2Y1 421 aaPredicted RBP5.51□□□□□ -1.53
PRPF39-210ENST00000556718 GYPEP15421 78 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 AKAP5P24588 427 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 KRTAP10-11P60412 298 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 ADCY2Q08462 1091 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 PDCD1Q15116 288 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 FSCN1Q16658 493 aaKnown RBP5.51□□□□□ -1.53
PRPF39-210ENST00000556718 IFIT1BQ5T764 474 aaKnown RBP5.51□□□□□ -1.53
PRPF39-210ENST00000556718 CMIPQ8IY22 773 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 OR52N2Q8NGI0 321 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 MYEOVQ96EZ4 313 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 TEKT5Q96M29 485 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 MYL10Q9BUA6 226 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 LSM14BQ9BX40 385 aaKnown RBP5.51□□□□□ -1.53
PRPF39-210ENST00000556718 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 MS4A5Q9H3V2 200 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 SERHL2Q9H4I8 314 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 ZBTB21Q9ULJ3 1066 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 GPR45Q9Y5Y3 372 aa5.51□□□□□ -1.53
PRPF39-210ENST00000556718 LOC102724159A0A0B4J2E5 919 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 MAFGO15525 162 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA12O60330 932 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PPFIA4O75335 1185 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 OFD1O75665 1012 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 APOL3O95236 402 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 GAAP10253 952 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 CASRP41180 1078 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 SLC5A3P53794 718 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 ODF1Q14990 250 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PWP2Q15269 919 aaKnown RBP5.5□□□□□ -1.53
PRPF39-210ENST00000556718 RRP12Q5JTH9 1297 aaKnown RBP5.5□□□□□ -1.53
PRPF39-210ENST00000556718 SAMD3Q8N6K7 520 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 FBXO41Q8TF61 875 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 TTC17Q96AE7 1141 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 ZNF496Q96IT1 587 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-210ENST00000556718 ORAI2Q96SN7 254 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 NDC1Q9BTX1 674 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms