RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ZBTB33Q86T24 672 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 TRIM59Q8IWR1 403 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 PARD3BQ8TEW8 1205 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 NXF3Q9H4D5 531 aaKnown RBP12.24□□□□□ -0.45
FOXN3-212ENST00000556541 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 RBAKQ9NYW8 714 aaPredicted RBP12.24□□□□□ -0.45
FOXN3-212ENST00000556541 LIMA1Q9UHB6 759 aaKnown RBP12.24□□□□□ -0.45
FOXN3-212ENST00000556541 GOLGA6L19H0YKK7 550 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 P4HA2O15460 535 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 XPOTO43592 962 aaKnown RBP12.23□□□□□ -0.45
FOXN3-212ENST00000556541 RECQL4O94761 1208 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 KRT13P13646 458 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 CYP3A5P20815 502 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 PAX3P23760 479 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 ACOT2P49753 483 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 WDR5P61964 334 aaKnown RBP12.23□□□□□ -0.45
FOXN3-212ENST00000556541 ZBTB6Q15916 424 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 TCP11X2Q5H9J9 407 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 CEP135Q66GS9 1140 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
FOXN3-212ENST00000556541 CBWD2Q8IUF1 395 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 WDR49Q8IV35 697 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 CEP120Q8N960 986 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 ANKRD20A12PQ8NF67 263 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 TOP1MTQ969P6 601 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 SAAL1Q96ER3 474 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
FOXN3-212ENST00000556541 SLC9A7Q96T83 725 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 GDF15Q99988 308 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 RSAD1Q9HA92 442 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 SNTG2Q9NY99 539 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 MAGEC2Q9UBF1 373 aaPredicted RBP12.23□□□□□ -0.45
FOXN3-212ENST00000556541 ZMYND8Q9ULU4 1186 aaPredicted RBP12.23□□□□□ -0.45
FOXN3-212ENST00000556541 PCDHB7Q9Y5E2 793 aa12.23□□□□□ -0.45
FOXN3-212ENST00000556541 SZT2Q5T011 3432 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
FOXN3-212ENST00000556541 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 N4BP1O75113 896 aaKnown RBP12.22□□□□□ -0.45
FOXN3-212ENST00000556541 CXCL8P10145 99 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 TNFSF9P41273 254 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 KCNJ6P48051 423 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 VAMP7P51809 220 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 GRIK3Q13003 919 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 KCNJ12Q14500 433 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 MAN2A1Q16706 1144 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 CCDC40Q4G0X9 1142 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 ZBTB41Q5SVQ8 909 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 ZNF365Q70YC5 407 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 LUZP1Q86V48 1076 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 GAS2L3Q86XJ1 694 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 SLC35C1Q96A29 364 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 CGRRF1Q99675 332 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.22□□□□□ -0.45
FOXN3-212ENST00000556541 MRPL9Q9BYD2 267 aaKnown RBP12.22□□□□□ -0.45
FOXN3-212ENST00000556541 TMEM117Q9H0C3 514 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 RC3H2Q9HBD1 1191 aaKnown RBP12.22□□□□□ -0.45
FOXN3-212ENST00000556541 SAMSN1Q9NSI8 373 aaKnown RBP12.22□□□□□ -0.45
FOXN3-212ENST00000556541 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 SLC38A7Q9NVC3 462 aa12.22□□□□□ -0.45
FOXN3-212ENST00000556541 GOLGA8IPA6NC78 632 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 GOLGA8JA6NMD2 632 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 LACTBL1A8MY62 500 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 MEFVO15553 781 aaPredicted RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 OFD1O75665 1012 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 DGKIO75912 1065 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 SYN1P17600 705 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 MAGEA10P43363 369 aaPredicted RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 EPHB4P54760 987 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 SARM1Q6SZW1 724 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 APTXQ7Z2E3 356 aaKnown RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 TMEM192Q8IY95 271 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 GSTCDQ8NEC7 633 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 ZSWIM2Q8NEG5 633 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 CACTINQ8WUQ7 758 aaKnown RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 ZNF689Q96CS4 500 aaPredicted RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 FAXDC2Q96IV6 333 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 PPP1R10Q96QC0 940 aaKnown RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 FNBP1Q96RU3 617 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 INTS13Q9NVM9 706 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 LRFN2Q9ULH4 789 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 UBQLN1Q9UMX0 589 aaKnown RBP12.21□□□□□ -0.45
FOXN3-212ENST00000556541 COQ4Q9Y3A0 265 aa12.21□□□□□ -0.45
FOXN3-212ENST00000556541 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 ARL5CA6NH57 179 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 LRRIQ3A6PVS8 624 aaPredicted RBP12.2□□□□□ -0.46
FOXN3-212ENST00000556541 PTGESO14684 152 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 STAU1O95793 577 aaKnown RBP12.2□□□□□ -0.46
FOXN3-212ENST00000556541 TPM2P07951 284 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 ACRP10323 421 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 HARSP12081 509 aaKnown RBP12.2□□□□□ -0.46
FOXN3-212ENST00000556541 LRPAP1P30533 357 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 KRT31Q15323 416 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 NAB2Q15742 525 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms