RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 CBX8Q9HC52 389 aa13.59□□□□□ -0.23
ABCD4-225ENST00000556517 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
ABCD4-225ENST00000556517 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 FGFR1P11362 822 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 ATP2A2P16615 1042 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 ATF7P17544 494 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 EEF1GP26641 437 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 MTIF2P46199 727 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 VAMP7P51809 220 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 DEFB103AP81534 67 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 RNASELQ05823 741 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 BFSP1Q12934 665 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 PSMD6Q15008 389 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 CRELD2Q6UXH1 353 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 TMEM192Q8IY95 271 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 PHOSPHO2Q8TCD6 241 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 HELQQ8TDG4 1101 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 TOP1MTQ969P6 601 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 MED15Q96RN5 788 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 GAD1Q99259 594 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 MRPL9Q9BYD2 267 aaKnown RBP13.58□□□□□ -0.24
ABCD4-225ENST00000556517 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 ASB7Q9H672 318 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 SLC38A7Q9NVC3 462 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 FANCLQ9NW38 375 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 KANSL3Q9P2N6 904 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 INPP5FQ9Y2H2 1132 aa13.58□□□□□ -0.24
ABCD4-225ENST00000556517 TTC26A0AVF1 554 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 KCNJ18B7U540 433 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 ADRB2P07550 413 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 TNNI1P19237 187 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 TFAMQ00059 246 aaKnown RBP13.57□□□□□ -0.24
ABCD4-225ENST00000556517 ENPEPQ07075 957 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 KCNJ12Q14500 433 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 TMEM132DQ14C87 1099 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 HSP90AA4PQ58FG1 418 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 AGMOQ6ZNB7 445 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 NT5DC4Q86YG4 428 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 WDR49Q8IV35 697 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 ZSWIM2Q8NEG5 633 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
ABCD4-225ENST00000556517 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 ZFP42Q96MM3 310 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 TMEM117Q9H0C3 514 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 PDE11AQ9HCR9 933 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 CNTN3Q9P232 1028 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 DERAQ9Y315 318 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
ABCD4-225ENST00000556517 C2CD2Q9Y426 696 aa13.57□□□□□ -0.24
ABCD4-225ENST00000556517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.57□□□□□ -0.24
ABCD4-225ENST00000556517 MEIS3P2A8K0S8 358 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 PES1O00541 588 aaKnown RBP13.56□□□□□ -0.24
ABCD4-225ENST00000556517 TNNC2P02585 160 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 THP07101 528 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 TMEM191BP0C7N4 346 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-225ENST00000556517 AP3M2P53677 418 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 MARSP56192 900 aaKnown RBP13.56□□□□□ -0.24
ABCD4-225ENST00000556517 GRIK3Q13003 919 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 NCAPHQ15003 741 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 IQCB1Q15051 598 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 TCP11X2Q5H9J9 407 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 NOMO2Q5JPE7 1267 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 FAM117BQ6P1L5 589 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 LRRC43Q8N309 656 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 ANKRD36BP1Q96IX9 119 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-225ENST00000556517 CGRRF1Q99675 332 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 GDF15Q99988 308 aa13.56□□□□□ -0.24
ABCD4-225ENST00000556517 SAMSN1Q9NSI8 373 aaKnown RBP13.56□□□□□ -0.24
ABCD4-225ENST00000556517 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-225ENST00000556517 SMIM28A0A1B0GU29 152 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 TBKBP1A7MCY6 615 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
ABCD4-225ENST00000556517 OFD1O75665 1012 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 DGKIO75912 1065 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 CLSTN1O94985 981 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 GJB5O95377 273 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 POMCP01189 267 aa13.55□□□□□ -0.24
ABCD4-225ENST00000556517 KCNE1P15382 129 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms