RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ANO9A1A5B4 782 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 SYCE1LA8MT33 242 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 EFCAB8A8MWE9 144 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 FADS2P1A8MWK0 482 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 KIF28PB7ZC32 967 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 F6X3S4 739 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8SH3BPF8 625 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 H3BQV1 296 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8RI6L899 631 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MATN2O00339 956 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 NCAM2O15394 837 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MEFVO15553 781 aaPredicted RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 RNGTTO60942 597 aaKnown RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 SUPT3HO75486 399 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 RHOBTB3O94955 611 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 FKBP9O95302 570 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 ALOX5P09917 674 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 C6orf222P0C671 652 aaPredicted RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 LINGO3P0C6S8 592 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CALM1P0DP23 149 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CALM2P0DP24 149 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CALM3P0DP25 149 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MTHFD1P11586 935 aaKnown RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 CYP2C9P11712 490 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 ATP6V1B1P15313 513 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 STMN1P16949 149 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 ATF3P18847 181 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TFE3P19532 575 aaPredicted RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 CFL1P23528 166 aaKnown RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 HMOX2P30519 316 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 GBP1P32455 592 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CD68P34810 354 aaPredicted RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 HNF1BP35680 557 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 PLCD1P51178 756 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CYP4F2P78329 520 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CYP4F3Q08477 520 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 ZNF252P-AS1Q0IIN9 211 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MTX1Q13505 466 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 RIPK1Q13546 671 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 IDI1Q13907 227 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 LRRC14Q15048 493 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CNGA2Q16280 664 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TPD52L1Q16890 204 aaPredicted RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 LETM2Q2VYF4 491 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 FAM83BQ5T0W9 1011 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TATDN1Q6P1N9 297 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MZT2AQ6P582 158 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 RANBP10Q6VN20 620 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 HDXQ7Z353 690 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 BNIPLQ7Z465 357 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 PPP1R42Q7Z4L9 355 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 STK32CQ86UX6 486 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 FMR1NBQ8N0W7 255 aaPredicted RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 SPICE1Q8N0Z3 855 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 RUSC2Q8N2Y8 1516 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 PCSK9Q8NBP7 692 aaKnown RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 ARRDC4Q8NCT1 418 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 SLC22A8Q8TCC7 542 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 GRIN3AQ8TCU5 1115 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 HERVK_113Q902F9 699 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 NCLNQ969V3 563 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 VPS50Q96JG6 964 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 RHOVQ96L33 236 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 ATP6V1G3Q96LB4 118 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TUBGCP5Q96RT8 1024 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 MNTQ99583 582 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 PRXQ9BXM0 1461 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 FUT8Q9BYC5 575 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 GBA3Q9H227 469 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TPK1Q9H3S4 243 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CAPN10Q9HC96 672 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TBC1D22BQ9NU19 505 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 PPARGC1AQ9UBK2 798 aaKnown RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 CTNNAL1Q9UBT7 734 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TRIM10Q9UDY6 481 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TAGLN3Q9UI15 199 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 TEKT2Q9UIF3 430 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 DDX19BQ9UMR2 479 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 CHMP2BQ9UQN3 213 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 EXOC6BQ9Y2D4 811 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 ZBTB1Q9Y2K1 713 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 FAM32AQ9Y421 112 aaKnown RBP6.63□□□□□ -1.35
TDP1-215ENST00000556498 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
TDP1-215ENST00000556498 SCAF11Q99590 1463 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 NLRP1Q9C000 1473 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 ERBINQ96RT1 1412 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 CNTNAP5Q8WYK1 1306 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 SRRM3A6NNA2 597 aaPredicted RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 C9IYK1 514 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 BTBD19C9JJ37 291 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8MH3BSY2 632 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 STX16-NPEPL1H3BU86 382 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 PSMD9O00233 223 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 DLL1O00548 723 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 MAP2K7O14733 419 aa6.62□□□□□ -1.35
TDP1-215ENST00000556498 DDX3YO15523 660 aaKnown RBP6.62□□□□□ -1.35
TDP1-215ENST00000556498 SHOX2O60902 331 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms