RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GCNT3O95395 438 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SLC4A1P02730 911 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TROVE2P10155 538 aaKnown RBP eCLIP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MUTP22033 750 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 RPS6P62753 249 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MRPS35P82673 323 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 GFPT1Q06210 699 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CUL3Q13618 768 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TNFAIP1Q13829 316 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 COG2Q14746 738 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 THEMIS2Q5TEJ8 643 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 NOP9Q86U38 636 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CPXCR1Q8N123 301 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CCDC110Q8TBZ0 833 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CCDC42Q96M95 316 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 RIT2Q99578 217 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CLIC5Q9NZA1 410 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 AJAP1Q9UKB5 411 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 FAM184BQ9ULE4 1060 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PCDHA13Q9Y5I0 950 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 UBIAD1Q9Y5Z9 338 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SSU72P8A0A1W2PR75 194 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MACROD2A1Z1Q3 448 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 STMND1H3BQB6 276 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CETN3O15182 167 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CLIC2O15247 247 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 EIF3DO15371 548 aaKnown RBP eCLIP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 KRT86O43790 486 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SRGAP2O75044 1071 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TBC1D8O95759 1140 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 NR3C1P04150 777 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PNMA6AP0CW24 399 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ACTN1P12814 892 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SLC9A1P19634 815 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MCM3P25205 808 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TMEM62Q0P6H9 643 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 RAPGEF1Q13905 1077 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 LRP8Q14114 963 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 EPHA7Q15375 998 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MAPRE1Q15691 268 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TKFCQ3LXA3 575 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PCNX4Q63HM2 1172 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TRIM68Q6AZZ1 485 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SHQ1Q6PI26 577 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MTHFD1LQ6UB35 978 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF720Q7Z2F6 126 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MAATS1Q7Z4T9 603 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 FRMD5Q7Z6J6 570 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 GALNT6Q8NCL4 622 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 C7orf57Q8NEG2 295 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 REPS2Q8NFH8 660 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 OLIG1Q8TAK6 271 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 GFM2Q969S9 779 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 LSM14BQ9BX40 385 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 IFIH1Q9BYX4 1025 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SIX2Q9NPC8 291 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CHST12Q9NRB3 414 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 HOMER2Q9NSB8 354 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SLC5A4Q9NY91 659 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CNOT7Q9UIV1 285 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 LRRC37A2A6NM11 1700 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 IQCA1LA6NCM1 817 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 DDX39AO00148 427 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PJA2O43164 708 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SNX2O60749 519 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 FLOT1O75955 427 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 STAMBPO95630 424 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 IL33O95760 270 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PCNAP12004 261 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ALAS1P13196 640 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ENDOUP21128 410 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CETN2P41208 172 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PGM5Q15124 567 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 WHAMMP3Q1A5X7 153 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PRAMEF18Q5VWM3 479 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CEP128Q6ZU80 1094 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TRIML2Q8N7C3 387 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CEP112Q8N8E3 955 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SH3TC2Q8TF17 1288 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF75CPQ92670 426 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 SYN2Q92777 582 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ZKSCAN4Q969J2 545 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TAAR1Q96RJ0 339 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 OSBPL9Q96SU4 736 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 TEKT3Q9BXF9 490 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 YIPF3Q9GZM5 350 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 CENPHQ9H3R5 247 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 NRDE2Q9H7Z3 1164 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 MLXIPQ9HAP2 919 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PARVGQ9HBI0 331 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 AGO4Q9HCK5 861 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 HPS4Q9NQG7 708 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 PKD2L1Q9P0L9 805 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ZNF112Q9UJU3 913 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 RAB21Q9UL25 225 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 BCS1LQ9Y276 419 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 BZW2Q9Y6E2 419 aaKnown RBP5.45□□□□□ -1.54
TMEM260-210ENST00000556422 ZHX2Q9Y6X8 837 aa5.45□□□□□ -1.54
TMEM260-210ENST00000556422 C19orf81C9J6K1 198 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms