RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CEP135Q66GS9 1140 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 BRSK2Q8IWQ3 736 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 CRIPAKQ8N1N5 446 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 FIBCD1Q8N539 461 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 CSGALNACT2Q8N6G5 542 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 CEP120Q8N960 986 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 CACTINQ8WUQ7 758 aaKnown RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 FAM212AQ96EL1 285 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 SAAL1Q96ER3 474 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 FBXL18Q96ME1 805 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 CEP63Q96MT8 703 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 FNBP1Q96RU3 617 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 HAPLN2Q9GZV7 340 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 IKZF4Q9H2S9 585 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 PRO3102Q9H379 93 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 DMAC2Q9NW81 257 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 RBAKQ9NYW8 714 aaPredicted RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 KLK14Q9P0G3 267 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 R3HCC1Q9Y3T6 440 aaKnown RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 RWDD3Q9Y3V2 267 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 BRCA2P51587 3418 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 TDRD15B5MCY1 1934 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 TTC26A0AVF1 554 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 SYCE3A1L190 88 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 ARL5CA6NH57 179 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 INPPL1O15357 1258 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 SLC16A3O15427 465 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 CXCL8P10145 99 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 KCNE1P15382 129 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 CD44P16070 742 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 TNFSF9P41273 254 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 STX17P56962 302 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 ENOX2Q16206 610 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 SLC10A6Q3KNW5 377 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 ZSCAN23Q3MJ62 389 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 LRIT3Q3SXY7 679 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 SEZ6Q53EL9 994 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 XKR4Q5GH76 650 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 CLLU1OSQ5K130 101 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 TTI2Q6NXR4 508 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 INTS8Q75QN2 995 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 FAM114A1Q8IWE2 563 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 FAM186BQ8IYM0 893 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 RDH13Q8NBN7 331 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 ZNF689Q96CS4 500 aaPredicted RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 DDX27Q96GQ7 796 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 SNX27Q96L92 541 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 SAMD11Q96NU1 681 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 CASD1Q96PB1 797 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 METTL14Q9HCE5 456 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 CNTN3Q9P232 1028 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 MAGEC2Q9UBF1 373 aaPredicted RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 UBQLN1Q9UMX0 589 aaKnown RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 DERAQ9Y315 318 aa8.29□□□□□ -1.08
TDP1-214ENST00000556063 FNDC1Q4ZHG4 1894 aaPredicted RBP8.29□□□□□ -1.08
TDP1-214ENST00000556063 SMIM28A0A1B0GU29 152 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TRIM49BA6NDI0 452 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 MEIS3P2A8K0S8 358 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 SMTNL1A8MU46 457 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 GRXCR1A8MXD5 290 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 LACTBL1A8MY62 500 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 FAM189A1O60320 539 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 STX10O60499 249 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 POMCP01189 267 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ALDH2P05091 517 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ADRB2P07550 413 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 LAG3P18627 525 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TNNI1P19237 187 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 CYP3A5P20815 502 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ALDH7A1P49419 539 aaKnown RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 SCNN1GP51170 649 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 RABGGTBP53611 331 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 AP3M2P53677 418 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 PMS1P54277 932 aaKnown RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 TPM4P67936 248 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ENPEPQ07075 957 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 CYP24A1Q07973 514 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TUSC3Q13454 348 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TMEM132DQ14C87 1099 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 PSMD6Q15008 389 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 CCDC40Q4G0X9 1142 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 PAN2Q504Q3 1202 aaKnown RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 ZBTB41Q5SVQ8 909 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 SPATA1Q5VX52 437 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 CRELD2Q6UXH1 353 aaPredicted RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 ALKAL1Q6UXT8 129 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TMCO2Q7Z6W1 182 aaPredicted RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 FILIP1Q7Z7B0 1213 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 CBWD2Q8IUF1 395 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 TMEM192Q8IY95 271 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ANKRD20A12PQ8NF67 263 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 BEST2Q8NFU1 509 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
TDP1-214ENST00000556063 TMC2Q8TDI7 906 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 CCDC127Q96BQ5 260 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 KIF12Q96FN5 646 aa8.28□□□□□ -1.08
TDP1-214ENST00000556063 ANKRD36BP1Q96IX9 119 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms