RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 PGM2L1Q6PCE3 622 aa6.38□□□□□ -1.39
ATXN3-234ENST00000555958 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-234ENST00000555958 AMOTL1Q8IY63 956 aa6.38□□□□□ -1.39
ATXN3-234ENST00000555958 SLC35B2Q8TB61 432 aa6.38□□□□□ -1.39
ATXN3-234ENST00000555958 STON2Q8WXE9 905 aa6.38□□□□□ -1.39
ATXN3-234ENST00000555958 TFAP2CQ92754 450 aa6.38□□□□□ -1.39
ATXN3-234ENST00000555958 UHRF1Q96T88 793 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-234ENST00000555958 GPR45Q9Y5Y3 372 aa6.38□□□□□ -1.39
ATXN3-234ENST00000555958 DISP3Q9P2K9 1392 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 TNIKQ9UKE5 1360 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 AHRRA9YTQ3 701 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 LEFTY2O00292 366 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 TRIM24O15164 1050 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 CDK11BP21127 795 aaKnown RBP6.37□□□□□ -1.39
ATXN3-234ENST00000555958 PTGS2P35354 604 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 SREBF1P36956 1147 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 FLT3LGP49771 235 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 HSPA2P54652 639 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 NHLH2Q02577 135 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 CLUL1Q15846 466 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 TRMT2AQ8IZ69 625 aaKnown RBP6.37□□□□□ -1.39
ATXN3-234ENST00000555958 PQLC1Q8N2U9 271 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 PPM1NQ8N819 430 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 FBXO18Q8NFZ0 1043 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 OR10H5Q8NGA6 315 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 LARP4BQ92615 738 aaKnown RBP6.37□□□□□ -1.39
ATXN3-234ENST00000555958 DCLRE1CQ96SD1 692 aaKnown RBP6.37□□□□□ -1.39
ATXN3-234ENST00000555958 DNM3Q9UQ16 869 aa6.37□□□□□ -1.39
ATXN3-234ENST00000555958 RBP3P10745 1247 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 NR4A1P22736 598 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 MGAT1P26572 445 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 TGFB2P61812 414 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 ZNF572Q7Z3I7 529 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-234ENST00000555958 MRGPREQ86SM8 312 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 SYT12Q8IV01 421 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 RNF169Q8NCN4 708 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 ZFP28Q8NHY6 868 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 ZNF768Q9H5H4 540 aaKnown RBP6.36□□□□□ -1.39
ATXN3-234ENST00000555958 TRPM5Q9NZQ8 1165 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 FZD1Q9UP38 647 aa6.36□□□□□ -1.39
ATXN3-234ENST00000555958 PTPRMP28827 1452 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 TEX14Q8IWB6 1497 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 UACAQ9BZF9 1416 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 ATRNL1Q5VV63 1379 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 CXorf49A8MYA2 514 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-234ENST00000555958 WNT10BO00744 389 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 AGXTP21549 392 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 CLRN1P58418 232 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
ATXN3-234ENST00000555958 AMPD3Q01432 767 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 HOXB13Q92826 284 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-234ENST00000555958 LENG9Q96B70 501 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 SENP6Q9GZR1 1112 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-234ENST00000555958 LDAHQ9H6V9 325 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 ZNF277Q9NRM2 450 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-234ENST00000555958 MKS1Q9NXB0 559 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 DISP1Q96F81 1524 aa6.35□□□□□ -1.39
ATXN3-234ENST00000555958 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 DRGXA6NNA5 263 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 PJA2O43164 708 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 SNRPA1P09661 255 aaKnown RBP6.34□□□□□ -1.39
ATXN3-234ENST00000555958 IL2RBP14784 551 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 ALOX15P16050 662 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-234ENST00000555958 FAM189BP81408 668 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 DPTQ07507 201 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 ITKQ08881 620 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 SP140Q13342 867 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 SEPT2Q15019 361 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 ATXN7L2Q5T6C5 722 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-234ENST00000555958 ZNF627Q7L945 461 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 GDF7Q7Z4P5 450 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 CBARPQ8N350 705 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-234ENST00000555958 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-234ENST00000555958 DPF2Q92785 391 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 FAXDC2Q96IV6 333 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 PHACTR3Q96KR7 559 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-234ENST00000555958 KDM5BQ9UGL1 1544 aa6.34□□□□□ -1.39
ATXN3-234ENST00000555958 UHRF1BP1LA0JNW5 1464 aa6.34□□□□□ -1.4
ATXN3-234ENST00000555958 ADAMTSL3P82987 1691 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 MADDQ8WXG6 1647 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 IQGAP2Q13576 1575 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 ENDOD1O94919 500 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 ITGB1P05556 798 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 LAG3P18627 525 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 IARSP41252 1262 aaKnown RBP6.33□□□□□ -1.4
ATXN3-234ENST00000555958 CDKN1CP49918 316 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-234ENST00000555958 EVA1CP58658 441 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 RAP2BP61225 183 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 MGAT2Q10469 447 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 TIGD2Q4W5G0 525 aa6.33□□□□□ -1.4
ATXN3-234ENST00000555958 RRP12Q5JTH9 1297 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms