RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ID4P47928 161 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 GPR15P49685 360 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 BLOC1S1P78537 153 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 SIM1P81133 766 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-216ENST00000555550 SCAPQ12770 1279 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 BMT2Q1RMZ1 405 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 ABHD15Q6UXT9 468 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 GPR149Q86SP6 731 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 GLB1L2Q8IW92 636 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 SRRM1Q8IYB3 904 aaKnown RBP5.34□□□□□ -1.55
SCFD1-216ENST00000555550 SLC29A3Q9BZD2 475 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 WNT8AQ9H1J5 351 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 APOBEC2Q9Y235 224 aaKnown RBP5.34□□□□□ -1.55
SCFD1-216ENST00000555550 KAT6AQ92794 2004 aa5.34□□□□□ -1.55
SCFD1-216ENST00000555550 DNAJC9-AS1A6NH13 148 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 DRGXA6NNA5 263 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 MARCH11A6NNE9 402 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 C1QL1O75973 258 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 CDKL5O76039 1030 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 FOSP01100 380 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-216ENST00000555550 LPLP06858 475 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 CNGA1P29973 690 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 CHN2P52757 468 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 SESN3P58005 492 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 ZNF169Q14929 603 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-216ENST00000555550 CCDC178Q5BJE1 867 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 CT83Q5H943 113 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 MICALCLQ6ZW33 695 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 OR14C36Q8NHC7 312 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 SCARB1Q8WTV0 552 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 RSAD2Q8WXG1 361 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 SLC9A6Q92581 669 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 CEP95Q96GE4 821 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 PRSS50Q9UI38 385 aa5.33□□□□□ -1.56
SCFD1-216ENST00000555550 B5MCH6 92 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 ITGA10O75578 1167 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 CFIP05156 583 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 ELANEP08246 267 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 LTA4HP09960 611 aaKnown RBP5.32□□□□□ -1.56
SCFD1-216ENST00000555550 CPEP16870 476 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 CANXP27824 592 aaKnown RBP5.32□□□□□ -1.56
SCFD1-216ENST00000555550 RARRES1P49788 294 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 LGALS4P56470 323 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 UGT8Q16880 541 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 STRA8Q7Z7C7 330 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 TOPORSQ9NS56 1045 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-216ENST00000555550 SEMA4GQ9NTN9 838 aa5.32□□□□□ -1.56
SCFD1-216ENST00000555550 EVLQ9UI08 416 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-216ENST00000555550 FDXRP22570 491 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 MASP1P48740 699 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 MXRA7P84157 204 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 TRIM25Q14258 630 aaKnown RBP5.31□□□□□ -1.56
SCFD1-216ENST00000555550 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 TSHZ3Q63HK5 1081 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 LYSMD2Q8IV50 215 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 OR56A1Q8NGH5 318 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 SLC35B2Q8TB61 432 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 SMG7Q92540 1137 aaKnown RBP5.31□□□□□ -1.56
SCFD1-216ENST00000555550 ALOXE3Q9BYJ1 711 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 KCTD10Q9H3F6 313 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 TMPRSS11EQ9UL52 423 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 EDARQ9UNE0 448 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 ATP11BQ9Y2G3 1177 aa5.31□□□□□ -1.56
SCFD1-216ENST00000555550 BRINP1O60477 761 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 TMPRSS15P98073 1019 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 NHLH1Q02575 133 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 PDCD1Q15116 288 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 PITRM1Q5JRX3 1037 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 AGAP9Q5VTM2 703 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 Q6ZNX1 250 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 MAPKAPK5Q8IW41 473 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 TMEM132CQ8N3T6 1108 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 ZFP28Q8NHY6 868 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 EAF2Q96CJ1 260 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-216ENST00000555550 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 PRDM12Q9H4Q4 367 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 CDY2AQ9Y6F7 541 aa5.3□□□□□ -1.56
SCFD1-216ENST00000555550 GOLGA8AA7E2F4 631 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 CDK17Q00537 523 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCFD1-216ENST00000555550 SPDYE7PQ495Y7 208 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 ATXN7L2Q5T6C5 722 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-216ENST00000555550 B3GNTL1Q67FW5 361 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-216ENST00000555550 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 ANKS1AQ92625 1134 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 ZSWIM1Q9BR11 485 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 KLHL11Q9NVR0 708 aa5.29□□□□□ -1.56
SCFD1-216ENST00000555550 PROB1E7EW31 1015 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 TMEM127O75204 238 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 ENPP1P22413 925 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 CCT2P78371 535 aaKnown RBP5.28□□□□□ -1.56
SCFD1-216ENST00000555550 SRSF4Q08170 494 aaKnown RBP5.28□□□□□ -1.56
SCFD1-216ENST00000555550 STAT4Q14765 748 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 FSCN1Q16658 493 aaKnown RBP5.28□□□□□ -1.56
SCFD1-216ENST00000555550 C19orf54Q5BKX5 351 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 PRAMEF14Q5SWL7 426 aa5.28□□□□□ -1.56
SCFD1-216ENST00000555550 SH2D3CQ8N5H7 860 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms