RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 AFMP43652 599 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 COASYQ13057 564 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
SRP54-206ENST00000555317 ZC2HC1CQ53FD0 456 aaPredicted RBP13.21□□□□□ -0.29
SRP54-206ENST00000555317 GLRA4Q5JXX5 417 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 SLFN12LQ6IEE8 588 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 KIAA1841Q6NSI8 718 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 ADGRD2Q7Z7M1 963 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 EFHBQ8N7U6 833 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 BCL7CQ8WUZ0 217 aaPredicted RBP13.21□□□□□ -0.29
SRP54-206ENST00000555317 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 SNX27Q96L92 541 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 ZBP1Q9H171 429 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 MRPL17Q9NRX2 175 aaKnown RBP13.21□□□□□ -0.29
SRP54-206ENST00000555317 USP25Q9UHP3 1055 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 ADAM28Q9UKQ2 775 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 FAM50BQ9Y247 325 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 SSX2IPQ9Y2D8 614 aa13.21□□□□□ -0.29
SRP54-206ENST00000555317 BDP1A6H8Y1 2624 aa13.21□□□□□ -0.3
SRP54-206ENST00000555317 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRP54-206ENST00000555317 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 HIDE1A8MVS5 230 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 H3BQ06 376 aaPredicted RBP13.2□□□□□ -0.3
SRP54-206ENST00000555317 ABLIM1O14639 778 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 PER2O15055 1255 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 OGTO15294 1046 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 SOD2P04179 222 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 SLFN14P0C7P3 912 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 CTSAP10619 480 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRP54-206ENST00000555317 SYKP43405 635 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 PPP2R3AQ06190 1150 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 DUSP6Q16828 381 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 PUS10Q3MIT2 529 aaKnown RBP13.2□□□□□ -0.3
SRP54-206ENST00000555317 L1TD1Q5T7N2 865 aaKnown RBP13.2□□□□□ -0.3
SRP54-206ENST00000555317 MRPL43Q8N983 215 aaKnown RBP13.2□□□□□ -0.3
SRP54-206ENST00000555317 FSIP1Q8NA03 581 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 UROC1Q96N76 676 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 HERC2P3Q9BVR0 1158 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 EMILIN2Q9BXX0 1053 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 RPF1Q9H9Y2 349 aaKnown RBP13.2□□□□□ -0.3
SRP54-206ENST00000555317 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 MARCH5Q9NX47 278 aa13.2□□□□□ -0.3
SRP54-206ENST00000555317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 SMIM28A0A1B0GU29 152 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 C2CD2LO14523 706 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 CXCL8P10145 99 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 MYBP10242 640 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 GLUD2P49448 558 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 ELAVL2Q12926 359 aaKnown RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 POSTNQ15063 836 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 CLUL1Q15846 466 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 LEXMQ3ZCV2 418 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 SEZ6Q53EL9 994 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 LLGL2Q6P1M3 1020 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 FUT10Q6P4F1 479 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 AUTS2Q8WXX7 1259 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 PLEKHA5Q9HAU0 1116 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 AGO2Q9UKV8 859 aaKnown RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 TCF20Q9UGU0 1960 aaKnown RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 VCANP13611 3396 aa13.19□□□□□ -0.3
SRP54-206ENST00000555317 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
SRP54-206ENST00000555317 A0A0B4J269 797 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 LINC01565O15544 149 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 XPOTO43592 962 aaKnown RBP13.18□□□□□ -0.3
SRP54-206ENST00000555317 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 PPP1R37O75864 691 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 KIF4AO95239 1232 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 KCNE1P15382 129 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 KCNQ1P51787 676 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 CREMQ03060 361 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 ADAM15Q13444 863 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 COL19A1Q14993 1142 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 PTCRAQ6ISU1 281 aaPredicted RBP13.18□□□□□ -0.3
SRP54-206ENST00000555317 CNNM4Q6P4Q7 775 aa13.18□□□□□ -0.3
SRP54-206ENST00000555317 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms