RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RTKN2Q8IZC4 609 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 SAMD3Q8N6K7 520 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ENDOVQ8N8Q3 282 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 ARHGEF2Q92974 986 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 MXRA8Q9BRK3 442 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 OSBPL1AQ9BXW6 950 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 VPS33BQ9H267 617 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 UNC45AQ9H3U1 944 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 AGPAT3Q9NRZ7 376 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 CD2APQ9Y5K6 639 aa11.44□□□□□ -0.58
MTHFD1-210ENST00000555252 MYH11P35749 1972 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 PSME4Q14997 1843 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 ADGRA3Q8IWK6 1321 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 TMEM120BA0PK00 339 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 HNRNPCL1O60812 293 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 SKAP2O75563 359 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 ACADSP16219 412 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 ATP6V1C1P21283 382 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 HSD17B4P51659 736 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 CAV1Q03135 178 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 STRN3Q13033 797 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 CALCOCO2Q13137 446 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 WASHC2DQ5SRD0 308 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 SYDE1Q6ZW31 735 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 LDHDQ86WU2 507 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 FITM2Q8N6M3 262 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 PRELID2Q8N945 189 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 MTMR14Q8NCE2 650 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 GLG1Q92896 1179 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 FIZ1Q96SL8 496 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 STRA6Q9BX79 667 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 MTFR1LQ9H019 292 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 WNT8AQ9H1J5 351 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 TMEM206Q9H813 350 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 OSGEPQ9NPF4 335 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
MTHFD1-210ENST00000555252 CNTNAP1P78357 1384 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 LRRD1A4D1F6 860 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 IPO5O00410 1097 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 P4HA2O15460 535 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 MTA2O94776 668 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 LINGO3P0C6S8 592 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 TAL1P17542 331 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CNGA1P29973 690 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 MAN1A1P33908 653 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 RASSF2P50749 326 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 SNRPFP62306 86 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 EN1Q05925 392 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 KCNA1Q09470 495 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 BIRC2Q13490 618 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CCDC137Q6PK04 289 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 SLC30A9Q6PML9 568 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 VSTM1Q6UX27 236 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 MCF2L2Q86YR7 1114 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 RIBC1Q8N443 379 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 STK32AQ8WU08 396 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 GMLQ99445 158 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ZSWIM1Q9BR11 485 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 MAP3K20Q9NYL2 800 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 RGPD3A6NKT7 1758 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 RGPD4Q7Z3J3 1758 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ICAM1P05362 532 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ARP10275 920 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ATP4AP20648 1035 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 TNFAIP3P21580 790 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CAP2P40123 477 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ABL2P42684 1182 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 INHBEP58166 350 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ROR2Q01974 943 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 GHRHRQ02643 423 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 PPARDQ03181 441 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CETN1Q12798 172 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 KIF22Q14807 665 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 SETDB1Q15047 1291 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 PDCD2Q16342 344 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 TSNAXIP1Q2TAA8 658 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 ZC2HC1CQ53FD0 456 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CEP128Q6ZU80 1094 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 C12orf56Q8IXR9 622 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 SYCP3Q8IZU3 236 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 PRCCQ92733 491 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 LXNQ9BS40 222 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 LARSQ9P2J5 1176 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 DBR1Q9UK59 544 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-210ENST00000555252 RBBP6Q7Z6E9 1792 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-210ENST00000555252 MROH7Q68CQ1 1323 aa11.41□□□□□ -0.58
MTHFD1-210ENST00000555252 CLRN2A0PK11 232 aa11.41□□□□□ -0.58
MTHFD1-210ENST00000555252 SMIM23A6NLE4 172 aa11.41□□□□□ -0.58
MTHFD1-210ENST00000555252 MAPK13O15264 365 aa11.41□□□□□ -0.58
MTHFD1-210ENST00000555252 MAGEB2O15479 319 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms