RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 KRT17Q04695 432 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 MPP2Q14168 576 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 TRIM68Q6AZZ1 485 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 ZNF720Q7Z2F6 126 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 STARD13Q9Y3M8 1113 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 FOXN3O00409 490 aaPredicted RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 THAP12O43422 761 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 PEX11AO75192 247 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 NDUFB10O96000 172 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 PECAM1P16284 738 aaPredicted RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 TAC1P20366 129 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 MAN1A1P33908 653 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 PCK1P35558 622 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 CRKP46108 304 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 RASSF2P50749 326 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 RAD23BP54727 409 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 INHBEP58166 350 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 HS2ST1Q7LGA3 356 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 ENDOVQ8N8Q3 282 aaKnown RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 PARD3BQ8TEW8 1205 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 SNF8Q96H20 258 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 DYDC2Q96IM9 177 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 MYLK2Q9H1R3 596 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 AGPAT3Q9NRZ7 376 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 NKX1-2Q9UD57 310 aaPredicted RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 ASIC3Q9UHC3 531 aa17.09■□□□□ 0.33
MARK3-209ENST00000555235 RPL26L1Q9UNX3 145 aaKnown RBP17.09■□□□□ 0.33
MARK3-209ENST00000555235 TP73O15350 636 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 SPOPO43791 374 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 LRRN2O75325 713 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 TRIM49P0CI25 452 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 TRIM49CP0CI26 452 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 TPBGLP0DKB5 382 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 TSNAXIP1Q2TAA8 658 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 ANO7Q6IWH7 933 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 TPH2Q8IWU9 490 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 ZBTB10Q96DT7 871 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 LRRC37BQ96QE4 947 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 WDR18Q9BV38 432 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 CPSF2Q9P2I0 782 aaKnown RBP17.08■□□□□ 0.33
MARK3-209ENST00000555235 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.08■□□□□ 0.33
MARK3-209ENST00000555235 USH1CQ9Y6N9 552 aa17.08■□□□□ 0.33
MARK3-209ENST00000555235 PIK3CDO00329 1044 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 HGSO14964 777 aaPredicted RBP17.08■□□□□ 0.32
MARK3-209ENST00000555235 ZBTB39O15060 712 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 MAPK13O15264 365 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 DCTN3O75935 186 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 CYP2J2P51589 502 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 CACNB3P54284 484 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 TCP10Q12799 353 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 LBRQ14739 615 aaKnown RBP17.08■□□□□ 0.32
MARK3-209ENST00000555235 SGSM1Q2NKQ1 1148 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 PHLDB3Q6NSJ2 640 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 SLC30A10Q6XR72 485 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 STXBP4Q6ZWJ1 553 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.08■□□□□ 0.32
MARK3-209ENST00000555235 SLC20A1Q8WUM9 679 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 ERP27Q96DN0 273 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 TSC22D3Q99576 134 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 CCDC77Q9BR77 488 aa17.08■□□□□ 0.32
MARK3-209ENST00000555235 PSMD10O75832 226 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 ACADSP16219 412 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 ALDH3A1P30838 453 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 CHKAP35790 457 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 WASHC2DQ5SRD0 308 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 SRRM1Q8IYB3 904 aaKnown RBP17.07■□□□□ 0.32
MARK3-209ENST00000555235 LMO3Q8TAP4 145 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 ETAA1Q9NY74 926 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 FAM198AQ9UFP1 575 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 DPPA5A6NC42 116 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
MARK3-209ENST00000555235 MAGEB2O15479 319 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 NPTXRO95502 500 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 GZMAP12544 262 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
MARK3-209ENST00000555235 PPP2R5CQ13362 524 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 KYNUQ16719 465 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 SGO2Q562F6 1265 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 FAM178BQ8IXR5 827 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 RPUSD2Q8IZ73 545 aaKnown RBP17.07■□□□□ 0.32
MARK3-209ENST00000555235 RIBC1Q8N443 379 aaPredicted RBP17.07■□□□□ 0.32
MARK3-209ENST00000555235 FAM13CQ8NE31 585 aa17.07■□□□□ 0.32
MARK3-209ENST00000555235 CFAP61Q8NHU2 1237 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms