RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
ACTN1-214ENST00000555075 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
ACTN1-214ENST00000555075 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
ACTN1-214ENST00000555075 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
ACTN1-214ENST00000555075 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
ACTN1-214ENST00000555075 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
ACTN1-214ENST00000555075 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-214ENST00000555075 TTC3P53804 2025 aa13.12□□□□□ -0.31
ACTN1-214ENST00000555075 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 TISP43B9A030 160 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 NT5C1B-RDH14C9J2C7 533 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 BIN1O00499 593 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 PSMA7O14818 248 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 CLIC2O15247 247 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 EXTL3O43909 919 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 IL18RAPO95256 599 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 CXCL8P10145 99 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
ACTN1-214ENST00000555075 TUSC3Q13454 348 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 ZNF658Q5TYW1 1059 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-214ENST00000555075 EPM2AIP1Q7L775 607 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-214ENST00000555075 KLHL23Q8NBE8 558 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
ACTN1-214ENST00000555075 P2RX5Q93086 422 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 SYAP1Q96A49 352 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-214ENST00000555075 SNX27Q96L92 541 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 UROC1Q96N76 676 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 CLSTN2Q9H4D0 955 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 CWH43Q9H720 699 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 NRDE2Q9H7Z3 1164 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 AGPAT3Q9NRZ7 376 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-214ENST00000555075 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 FRMD4BQ9Y2L6 1034 aa13.11□□□□□ -0.31
ACTN1-214ENST00000555075 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 CASTOR2A6NHX0 329 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 H3BNC9 293 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 RFXAPO00287 272 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 FGF18O76093 207 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 PBX3P40426 434 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 EHHADHQ08426 723 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
ACTN1-214ENST00000555075 SURF1Q15526 300 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 KIAA1841Q6NSI8 718 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 SLC39A4Q6P5W5 647 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 USP37Q86T82 979 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 ZNF280BQ86YH2 543 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
ACTN1-214ENST00000555075 RDH13Q8NBN7 331 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 KIAA0895Q8NCT3 520 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
ACTN1-214ENST00000555075 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
ACTN1-214ENST00000555075 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 TSPAN18Q96SJ8 248 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
ACTN1-214ENST00000555075 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 DNAJB4Q9UDY4 337 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 UBQLN1Q9UMX0 589 aaKnown RBP13.1□□□□□ -0.31
ACTN1-214ENST00000555075 NUB1Q9Y5A7 615 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 STYXL1Q9Y6J8 313 aa13.1□□□□□ -0.31
ACTN1-214ENST00000555075 LACTBL1A8MY62 500 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 PDXKO00764 312 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 ABLIM1O14639 778 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 NRP1O14786 923 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 TRAPPC3O43617 180 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 DDHD2O94830 711 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 GALTP07902 379 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 TNFSF9P41273 254 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 SLC11A1P49279 550 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 UBE3AQ05086 875 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 SPAG1Q07617 926 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 SLC10A6Q3KNW5 377 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 KLHL10Q6JEL2 608 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 TMC7Q7Z402 723 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-214ENST00000555075 TRIML1Q8N9V2 468 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 POF1BQ8WVV4 589 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 GBF1Q92538 1859 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 IKZF4Q9H2S9 585 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 ASB7Q9H672 318 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 MIOSQ9NXC5 875 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 CNTN3Q9P232 1028 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 KIAA1468Q9P260 1216 aa13.09□□□□□ -0.31
ACTN1-214ENST00000555075 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms