RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 C7orf72A4D263 438 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 FAM221BA6H8Z2 402 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 TMEM232C9JQI7 657 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 KLRF2D3W0D1 207 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 NOP56O00567 594 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 ZBTB43O43298 467 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 EPB41L2O43491 1005 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 STK10O94804 968 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 NDUFB10O96000 172 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SLC3A2P08195 630 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 PDHBP11177 359 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 TOP1P11387 765 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 PNLIPP16233 465 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 ATP2B1P20020 1258 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 YY1P25490 414 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 NOVP48745 357 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 METAP2P50579 478 aaKnown RBP eCLIP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 EPHB3P54753 998 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 EVCP57679 992 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 PPP2R2AP63151 447 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SRSF3P84103 164 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 GRB10Q13322 594 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 MOGSQ13724 837 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 FKBP1CQ5VVH2 108 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 HLA-DQA1Q5Y7H0 255 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 CCDC174Q6PII3 467 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 GADL1Q6ZQY3 521 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 TMTC3Q6ZXV5 915 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SGMS1Q86VZ5 419 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 DGKHQ86XP1 1220 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 HOMER1Q86YM7 354 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 AMOTL1Q8IY63 956 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SCYL3Q8IZE3 742 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 ADGRF4Q8IZF3 695 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 TMEM145Q8NBT3 493 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 FBXO15Q8NCQ5 510 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SMARCC2Q8TAQ2 1214 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 KCNN1Q92952 543 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 ZNF274Q96GC6 653 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 FAM84AQ96KN4 292 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SYT3Q9BQG1 590 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 NKX2-4Q9H2Z4 354 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 JMJD4Q9H9V9 463 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 GBA2Q9HCG7 927 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 TNFRSF12AQ9NP84 129 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 CABP5Q9NP86 173 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 TCP11L1Q9NUJ3 509 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 FAM53CQ9NYF3 392 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 VPS54Q9P1Q0 977 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SWAP70Q9UH65 585 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 PFDN2Q9UHV9 154 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 HERC5Q9UII4 1024 aaKnown RBP3.63□□□□□ -1.83
SEC23A-208ENST00000555017 SIT1Q9Y3P8 196 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 LOC285556D6RIA3 1793 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 DOCK3Q8IZD9 2030 aa3.63□□□□□ -1.83
SEC23A-208ENST00000555017 MCM3APO60318 1980 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 NPHP3-ACAD11A0A0J9YXS1 232 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 ERICH2A1L162 156 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 VPS37CA5D8V6 355 aaPredicted RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 IQCA1LA6NCM1 817 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 EDIL3O43854 480 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 DHX16O60231 1041 aaKnown RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 DLX3O60479 287 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 CTNND1O60716 968 aaKnown RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 TTLL1O95922 423 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 HSP90AA1P07900 732 aaKnown RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 HMGB1P09429 215 aaKnown RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 PARP1P09874 1014 aaKnown RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 SNHG28P0DPA3 235 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 CYP2C8P10632 490 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 VCAM1P19320 739 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 SYT1P21579 422 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 PTGS1P23219 599 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 L1CAMP32004 1257 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 LIFRP42702 1097 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 ERVFRD-1P60508 538 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 UBXN2AP68543 259 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 CAP1Q01518 475 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 CEBPZQ03701 1054 aaKnown RBP3.62□□□□□ -1.83
SEC23A-208ENST00000555017 ZNF543Q08ER8 600 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 TNFAIP1Q13829 316 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 BECN1Q14457 450 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 SNX17Q15036 470 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 NPY5RQ15761 445 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 UBE2SQ16763 222 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 QRICH1Q2TAL8 776 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 USH1GQ495M9 461 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 FBLN7Q53RD9 439 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 FOXB2Q5VYV0 432 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 EEF1DP3Q658K8 133 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 KRT40Q6A162 431 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 WWC2Q6AWC2 1192 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 CYP4F22Q6NT55 531 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 RPTNQ6XPR3 784 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 ATG14Q6ZNE5 492 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 TMEM179Q6ZVK1 233 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 CATIPQ7Z7H3 387 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 LDHDQ86WU2 507 aa3.62□□□□□ -1.83
SEC23A-208ENST00000555017 IQCA1Q86XH1 822 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms