RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HOMER3Q9NSC5 361 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 PLA2G4CQ9UP65 541 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 NEU3Q9UQ49 428 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 CHMP3Q9Y3E7 222 aa3.71□□□□□ -1.81
SEC23A-207ENST00000554615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 E7EVH7 732 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ALOX15BO15296 676 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 BUB1BO60566 1050 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SNNO75324 88 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 PAPLNO95428 1278 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 EFEMP2O95967 443 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 PRKCGP05129 697 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 EDN1P05305 212 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 H2AFZP0C0S5 128 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 BMP3P12645 472 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 IDEP14735 1019 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 RPL13P26373 211 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 HNRNPFP52597 415 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 TNNC1P63316 161 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 NOMO3P69849 1222 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 IRX1P78414 480 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 TAP1Q03518 808 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ADCY2Q08462 1091 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 KRT72Q14CN4 511 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ZBTB6Q15916 424 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 HSF5Q4G112 596 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 TEX44Q53QW1 395 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CFAP58Q5T655 872 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 RNASEH2BQ5TBB1 312 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ZPBP2Q6X784 338 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 H2AFVQ71UI9 128 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 MIGA2Q7L4E1 593 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 BEND5Q7L4P6 421 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SLC13A5Q86YT5 568 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 MAPKAPK5Q8IW41 473 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 NAT8LQ8N9F0 302 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 FAM76AQ8TAV0 307 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ZSCAN18Q8TBC5 510 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 UTP4Q969X6 686 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC47Q96A33 483 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 LRRC45Q96CN5 670 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 GRAMD1AQ96CP6 724 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 MCRS1Q96EZ8 462 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 XYLT2Q9H1B5 865 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 C1orf21Q9H246 121 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 MMADHCQ9H3L0 296 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SLC39A2Q9NP94 309 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 PXMP2Q9NR77 195 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 BIN2Q9UBW5 565 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF214Q9UL59 606 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 TFR2Q9UP52 801 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 NR2E1Q9Y466 385 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ASB3Q9Y575 518 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ZHX2Q9Y6X8 837 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 MINDY4BA8MYZ0 360 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CETN3O15182 167 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 RAD21O60216 631 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 HNRNPCL1O60812 293 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 FLOT1O75955 427 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 PRKCHP24723 683 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 RPL21P46778 160 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CASP4P49662 377 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 TGFB2P61812 414 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 FXNQ16595 210 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ADGRD1Q6QNK2 874 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CEP128Q6ZU80 1094 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 HEATR3Q7Z4Q2 680 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 GPBP1Q86WP2 473 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 MCOLN2Q8IZK6 566 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 WDTC1Q8N5D0 677 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ALLCQ8N6M5 410 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ARFGAP1Q8N6T3 406 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ERMNQ8TAM6 284 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SYTL5Q8TDW5 730 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 RAPGEF5Q92565 580 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SKA1Q96BD8 255 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 COA7Q96BR5 231 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CLMNQ96JQ2 1002 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC42Q96M95 316 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 PARVGQ9HBI0 331 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF70Q9UC06 446 aaPredicted RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SLC24A2Q9UI40 661 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 USP21Q9UK80 565 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 KCNH4Q9UQ05 1017 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 SNCAIPQ9Y6H5 919 aa3.71□□□□□ -1.82
SEC23A-207ENST00000554615 TMEM191CA6NGB0 347 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 B4GALT4O60513 344 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 CTNND1O60716 968 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ECM2O94769 699 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PROSCO94903 275 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 HOXC6P09630 235 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TMEM191BP0C7N4 346 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 T-ENOLP0DO92 83 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ATF7P17544 494 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 NR1D1P20393 614 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RAP1GDS1P52306 607 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 STX17P56962 302 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ASIC1P78348 528 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ADAM17P78536 824 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms