RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 QPCTQ16769 361 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 GJC2Q5T442 439 aaPredicted RBP15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 FAM160B1Q5W0V3 765 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 LMO3Q8TAP4 145 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 DEPTORQ8TB45 409 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 MS4A4AQ96JQ5 239 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 LUC7LQ9NQ29 371 aaKnown RBP15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 ARHGAP28Q9P2N2 729 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 TMEM59LQ9UK28 342 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 PNMA3Q9UL41 463 aa15.77■□□□□ 0.12
PPP4R3A-201ENST00000554308 A6NNZ2 444 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 TMCO5BA8MYB1 307 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 HMGB1P1B2RPK0 211 aaPredicted RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 H0YGN5 161 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 K7ERI5 159 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 FOXN3O00409 490 aaPredicted RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CEP104O60308 925 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 FAM107AO95990 144 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 SOX5P35711 763 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 USP8P40818 1118 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ZNF844Q08AG5 666 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 STRN3Q13033 797 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 TUBB8Q3ZCM7 444 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 BRDTQ58F21 947 aaPredicted RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ALKBH5Q6P6C2 394 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CCDC13Q8IYE1 715 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CYFIP2Q96F07 1278 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 NIFKQ9BYG3 293 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 DDX47Q9H0S4 455 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 NAGPAQ9UK23 515 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 NFS1Q9Y697 457 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 LOC285556D6RIA3 1793 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ITGA4P13612 1032 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 IBSPP21815 317 aaPredicted RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 SNRPFP62306 86 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 TNNC1P63316 161 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CELF3Q5SZQ8 465 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CCDC91Q7Z6B0 441 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 GLYCTKQ8IVS8 523 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ARHGEF19Q8IW93 802 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 PARD3BQ8TEW8 1205 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ZNF668Q96K58 619 aaPredicted RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ZBTB45Q96K62 511 aaPredicted RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 GPR20Q99678 358 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 ISCUQ9H1K1 167 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 SEPT11Q9NVA2 429 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CNOT8Q9UFF9 292 aaKnown RBP15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 WDR81Q562E7 1941 aa15.76■□□□□ 0.11
PPP4R3A-201ENST00000554308 CELF2O95319 508 aaKnown RBP15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 CETPP11597 493 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 ACOT2P49753 483 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 RTP1P59025 263 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 RPS6KA1Q15418 735 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 LRRC71Q8N4P6 559 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 BRI3BPQ8WY22 251 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 KAT5Q92993 513 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 ZBTB10Q96DT7 871 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 ANKFY1Q9P2R3 1169 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 SRGAP2CP0DJJ0 459 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 FERP16591 822 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 ADORA2AP29274 412 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 COPB2P35606 906 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 PRKCIP41743 596 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 GSCP56915 257 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 ACTN3Q08043 901 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 LMBRD2Q68DH5 695 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 C6orf89Q6UWU4 347 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 VPS36Q86VN1 386 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 PPM1KQ8N3J5 372 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 TMEM174Q8WUU8 243 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 TRAPPC12Q8WVT3 735 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 PRPF31Q8WWY3 499 aaKnown RBP15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 TAF4BQ92750 862 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 HVCN1Q96D96 273 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 A0A0G2JMZ2 1700 aa15.75■□□□□ 0.11
PPP4R3A-201ENST00000554308 KIF4AO95239 1232 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 MYZAPP0CAP1 466 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 ARL2P36404 184 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 GTF2A2P52657 109 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 MICALCLQ6ZW33 695 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 SEMA4DQ92854 862 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 TARS2Q9BW92 718 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 DDX20Q9UHI6 824 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 DDX3XO00571 662 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■■□□ 14.8
PPP4R3A-201ENST00000554308 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 CTNNA1P35221 906 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 TARBP2Q15633 366 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 SEZ6Q53EL9 994 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 CCDC62Q6P9F0 684 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 ILDR2Q71H61 639 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 SPATS2Q86XZ4 545 aaKnown RBP15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 GPD1LQ8N335 351 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 SLC12A6Q9UHW9 1150 aa15.74■□□□□ 0.11
PPP4R3A-201ENST00000554308 GOLGA6L10A6NI86 522 aa15.73■□□□□ 0.11
PPP4R3A-201ENST00000554308 DAPK3O43293 454 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms