RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 MBNL2Q5VZF2 373 aaKnown RBP6.38□□□□□ -1.39
ATXN3-225ENST00000554214 PGM2L1Q6PCE3 622 aa6.38□□□□□ -1.39
ATXN3-225ENST00000554214 DRICH1Q6PGQ1 229 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-225ENST00000554214 AMOTL1Q8IY63 956 aa6.38□□□□□ -1.39
ATXN3-225ENST00000554214 SLC35B2Q8TB61 432 aa6.38□□□□□ -1.39
ATXN3-225ENST00000554214 STON2Q8WXE9 905 aa6.38□□□□□ -1.39
ATXN3-225ENST00000554214 TFAP2CQ92754 450 aa6.38□□□□□ -1.39
ATXN3-225ENST00000554214 UHRF1Q96T88 793 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-225ENST00000554214 GPR45Q9Y5Y3 372 aa6.38□□□□□ -1.39
ATXN3-225ENST00000554214 DISP3Q9P2K9 1392 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 TNIKQ9UKE5 1360 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 AHRRA9YTQ3 701 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 LEFTY2O00292 366 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 TRIM24O15164 1050 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 CDK11BP21127 795 aaKnown RBP6.37□□□□□ -1.39
ATXN3-225ENST00000554214 PTGS2P35354 604 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 SREBF1P36956 1147 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 FLT3LGP49771 235 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 HSPA2P54652 639 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 NHLH2Q02577 135 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 CLUL1Q15846 466 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 NECAB2Q7Z6G3 386 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 TRMT2AQ8IZ69 625 aaKnown RBP6.37□□□□□ -1.39
ATXN3-225ENST00000554214 PQLC1Q8N2U9 271 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 PPM1NQ8N819 430 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 FBXO18Q8NFZ0 1043 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 OR10H5Q8NGA6 315 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 LARP4BQ92615 738 aaKnown RBP6.37□□□□□ -1.39
ATXN3-225ENST00000554214 DCLRE1CQ96SD1 692 aaKnown RBP6.37□□□□□ -1.39
ATXN3-225ENST00000554214 DNM3Q9UQ16 869 aa6.37□□□□□ -1.39
ATXN3-225ENST00000554214 RBP3P10745 1247 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 NR4A1P22736 598 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 MGAT1P26572 445 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 TGFB2P61812 414 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 ZNF572Q7Z3I7 529 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-225ENST00000554214 MRGPREQ86SM8 312 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 SYT12Q8IV01 421 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 RNF169Q8NCN4 708 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 ZFP28Q8NHY6 868 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 ZNF768Q9H5H4 540 aaKnown RBP6.36□□□□□ -1.39
ATXN3-225ENST00000554214 TRPM5Q9NZQ8 1165 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 FZD1Q9UP38 647 aa6.36□□□□□ -1.39
ATXN3-225ENST00000554214 PTPRMP28827 1452 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 TEX14Q8IWB6 1497 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 UACAQ9BZF9 1416 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 ATRNL1Q5VV63 1379 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 CXorf49A8MYA2 514 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-225ENST00000554214 WNT10BO00744 389 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 AGXTP21549 392 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 CLRN1P58418 232 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
ATXN3-225ENST00000554214 AMPD3Q01432 767 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 HOXB13Q92826 284 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-225ENST00000554214 LENG9Q96B70 501 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 SENP6Q9GZR1 1112 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-225ENST00000554214 LDAHQ9H6V9 325 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 ZNF277Q9NRM2 450 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-225ENST00000554214 MKS1Q9NXB0 559 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 DISP1Q96F81 1524 aa6.35□□□□□ -1.39
ATXN3-225ENST00000554214 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 DRGXA6NNA5 263 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 PJA2O43164 708 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 SNRPA1P09661 255 aaKnown RBP6.34□□□□□ -1.39
ATXN3-225ENST00000554214 IL2RBP14784 551 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 ALOX15P16050 662 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-225ENST00000554214 FAM189BP81408 668 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 DPTQ07507 201 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 ITKQ08881 620 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 SP140Q13342 867 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 SEPT2Q15019 361 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 ATXN7L2Q5T6C5 722 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-225ENST00000554214 ZNF627Q7L945 461 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 GDF7Q7Z4P5 450 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 CBARPQ8N350 705 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-225ENST00000554214 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-225ENST00000554214 DPF2Q92785 391 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 FAXDC2Q96IV6 333 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 PHACTR3Q96KR7 559 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-225ENST00000554214 KDM5BQ9UGL1 1544 aa6.34□□□□□ -1.39
ATXN3-225ENST00000554214 UHRF1BP1LA0JNW5 1464 aa6.34□□□□□ -1.4
ATXN3-225ENST00000554214 ADAMTSL3P82987 1691 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 MADDQ8WXG6 1647 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 IQGAP2Q13576 1575 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 ENDOD1O94919 500 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 ITGB1P05556 798 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 LAG3P18627 525 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 IARSP41252 1262 aaKnown RBP6.33□□□□□ -1.4
ATXN3-225ENST00000554214 CDKN1CP49918 316 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-225ENST00000554214 EVA1CP58658 441 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 RAP2BP61225 183 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 MGAT2Q10469 447 aa6.33□□□□□ -1.4
ATXN3-225ENST00000554214 TIGD2Q4W5G0 525 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms