RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 POU5F1BQ06416 359 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 TUSC3Q13454 348 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 HSP90AA2PQ14568 343 aaPredicted RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 AMHR2Q16671 573 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 PRSS55Q6UWB4 352 aaPredicted RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 SLC44A3Q8N4M1 653 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 GPR152Q8TDT2 470 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 HDAC7Q8WUI4 952 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 NXPE3Q969Y0 559 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 ADPGKQ9BRR6 497 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 GPRC5CQ9NQ84 441 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 ARHGEF3Q9NR81 526 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 CHST7Q9NS84 486 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 PRMT7Q9NVM4 692 aaPredicted RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 FNIP2Q9P278 1114 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 CACNG4Q9UBN1 327 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 BOLA1Q9Y3E2 137 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 NUMBLQ9Y6R0 609 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 TDRD15B5MCY1 1934 aaKnown RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 PTPRZ1P23471 2315 aaPredicted RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 USP34Q70CQ2 3546 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 A0A1B0GUA9 196 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 KRBA1A5PL33 1030 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 TRIM66O15016 1216 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 N4BP3O15049 544 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 CTDNEP1O95476 244 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 DCNP07585 359 aaKnown RBP9.75□□□□□ -0.85
TDP1-208ENST00000553989 LAMP2P13473 410 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 FSHRP23945 695 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 ID4P47928 161 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 PSMD5Q16401 504 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 RTP2Q5QGT7 225 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 PPM1LQ5SGD2 360 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 FAM171A1Q5VUB5 890 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 ZC3H14Q6PJT7 736 aaKnown RBP9.75□□□□□ -0.85
TDP1-208ENST00000553989 GRASPQ7Z6J2 395 aaPredicted RBP9.75□□□□□ -0.85
TDP1-208ENST00000553989 DIS3L2Q8IYB7 885 aaKnown RBP9.75□□□□□ -0.85
TDP1-208ENST00000553989 NECAB1Q8N987 351 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 PRIMPOLQ96LW4 560 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 HSD17B14Q9BPX1 270 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 TTPALQ9BTX7 342 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 NFKBIZQ9BYH8 718 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 RHOBTB2Q9BYZ6 727 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 C2orf40Q9H1Z8 148 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 OCEL1Q9H607 264 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
TDP1-208ENST00000553989 C2orf72A6NCS6 295 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 BTBD18B2RXH4 712 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 CCL16O15467 120 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 XYLBO75191 536 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 KIF4AO95239 1232 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 EFEMP2O95967 443 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 LMNAP02545 664 aaKnown RBP9.74□□□□□ -0.85
TDP1-208ENST00000553989 THP07101 528 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 C8AP07357 584 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 MCM7P33993 719 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 CLCN1P35523 988 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 ZNF445P59923 1031 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 ELAVL2Q12926 359 aaKnown RBP9.74□□□□□ -0.85
TDP1-208ENST00000553989 PRPF4BQ13523 1007 aaKnown RBP9.74□□□□□ -0.85
TDP1-208ENST00000553989 HTR4Q13639 388 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 MAPK6Q16659 721 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 DCLRE1AQ6PJP8 1040 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 GPR65Q8IYL9 337 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 GSTCDQ8NEC7 633 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 ERMNQ8TAM6 284 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 DEPTORQ8TB45 409 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 TNFRSF25Q93038 417 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 TRIM44Q96DX7 344 aaPredicted RBP9.74□□□□□ -0.85
TDP1-208ENST00000553989 PAAF1Q9BRP4 392 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 SNTG2Q9NY99 539 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 FBXW11Q9UKB1 542 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 GDAQ9Y2T3 454 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 SIT1Q9Y3P8 196 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 R4GN57 208 aa9.74□□□□□ -0.85
TDP1-208ENST00000553989 ARHGEF35A5YM69 484 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 RECQL4O94761 1208 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 CD2BP2O95400 341 aaKnown RBP9.73□□□□□ -0.85
TDP1-208ENST00000553989 MBD3O95983 291 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 C1RP00736 705 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 PRKCBP05771 671 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 NEK4P51957 841 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 NTHL1P78549 312 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 CCDC173Q0VFZ6 552 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 CUL4AQ13619 759 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 SAFBQ15424 915 aaKnown RBP eCLIP9.73□□□□□ -0.85
TDP1-208ENST00000553989 ME3Q16798 604 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 HS1BP3Q53T59 392 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 PDXDC1Q6P996 788 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 LILRA6Q6PI73 481 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 POTEGQ6S5H5 508 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 MTSS1LQ765P7 747 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 SLC7A14Q8TBB6 771 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 GTF3C6Q969F1 213 aa9.73□□□□□ -0.85
TDP1-208ENST00000553989 SHDQ96IW2 340 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms