RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 TNNI1P19237 187 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TRIM21P19474 475 aaKnown RBP12.74□□□□□ -0.37
NEK9-202ENST00000553823 CD52P31358 61 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 KLK7P49862 253 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 WNT7BP56706 349 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TLE2Q04725 743 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TRIM60Q495X7 471 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 UBXN11Q5T124 520 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 KRT39Q6A163 491 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TWF2Q6IBS0 349 aaKnown RBP12.74□□□□□ -0.37
NEK9-202ENST00000553823 LRRC8DQ7L1W4 858 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TMEM192Q8IY95 271 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 NEK11Q8NG66 645 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 IQCDQ96DY2 449 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 CGRRF1Q99675 332 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
NEK9-202ENST00000553823 OSBPL7Q9BZF2 842 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TMEM117Q9H0C3 514 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 TOPORSQ9NS56 1045 aaPredicted RBP12.74□□□□□ -0.37
NEK9-202ENST00000553823 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 PADI3Q9ULW8 664 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 GYPCP04921 128 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 TPM1P09493 284 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 PON1P27169 355 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 AP3M2P53677 418 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 MBTPS1Q14703 1052 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 C15orf39Q6ZRI6 1047 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 WDR49Q8IV35 697 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 CCDC150Q8NCX0 1101 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 ASB7Q9H672 318 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 FAM207AQ9NSI2 230 aaPredicted RBP12.73□□□□□ -0.37
NEK9-202ENST00000553823 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
NEK9-202ENST00000553823 PDCD11Q14690 1871 aaKnown RBP12.73□□□□□ -0.37
NEK9-202ENST00000553823 SCN5AQ14524 2016 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 TANC1Q9C0D5 1861 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 TTC26A0AVF1 554 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 AKR1B15C9JRZ8 316 aaPredicted RBP12.72□□□□□ -0.37
NEK9-202ENST00000553823 C4BPAP04003 597 aaKnown RBP12.72□□□□□ -0.37
NEK9-202ENST00000553823 SLC9A1P19634 815 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
NEK9-202ENST00000553823 DSC3Q14574 896 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 ZACNQ401N2 412 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 EPC2Q52LR7 807 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 LMBRD2Q68DH5 695 aaPredicted RBP12.72□□□□□ -0.37
NEK9-202ENST00000553823 CD302Q8IX05 232 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 CPLX3Q8WVH0 158 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 TTYH3Q9C0H2 523 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 INTS2Q9H0H0 1204 aaKnown RBP12.72□□□□□ -0.37
NEK9-202ENST00000553823 TMX1Q9H3N1 280 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 NXF3Q9H4D5 531 aaKnown RBP12.72□□□□□ -0.37
NEK9-202ENST00000553823 PLEKHA5Q9HAU0 1116 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 PLCB1Q9NQ66 1216 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 FAM105AQ9NUU6 356 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 SNTG2Q9NY99 539 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 COQ4Q9Y3A0 265 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 IPPQ9Y573 584 aa12.72□□□□□ -0.37
NEK9-202ENST00000553823 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 MEFVO15553 781 aaPredicted RBP12.71□□□□□ -0.37
NEK9-202ENST00000553823 RECQL4O94761 1208 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 PARNO95453 639 aaKnown RBP12.71□□□□□ -0.37
NEK9-202ENST00000553823 CASP14P31944 242 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEK9-202ENST00000553823 RAB27AP51159 221 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 BIRC3Q13489 604 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 TDRD10Q5VZ19 366 aaKnown RBP12.71□□□□□ -0.37
NEK9-202ENST00000553823 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 NT5DC4Q86YG4 428 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 CNGA4Q8IV77 575 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 HACE1Q8IYU2 909 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 SMG8Q8ND04 991 aaKnown RBP12.71□□□□□ -0.37
NEK9-202ENST00000553823 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 OR5B17Q8NGF7 314 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 LMO3Q8TAP4 145 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 TAS1R2Q8TE23 839 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 TRIM44Q96DX7 344 aaPredicted RBP12.71□□□□□ -0.37
NEK9-202ENST00000553823 ANKRD36BP1Q96IX9 119 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 FAM84AQ96KN4 292 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 SNX27Q96L92 541 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 APOL6Q9BWW8 343 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 IFIH1Q9BYX4 1025 aaKnown RBP12.71□□□□□ -0.37
NEK9-202ENST00000553823 EDEM3Q9BZQ6 932 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
NEK9-202ENST00000553823 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms