RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 SNX27Q96L92 541 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 RAB34Q9BZG1 259 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 PDZD7Q9H5P4 517 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 ZFP37Q9Y6Q3 630 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-210ENST00000553779 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 TICRRQ7Z2Z1 1910 aa10.92□□□□□ -0.66
ACTN1-210ENST00000553779 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 TRAPPC3O43617 180 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 PI15O43692 258 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 MED24O75448 989 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 HNRNPA1P09651 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 LAMP2P13473 410 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 CCT6AP40227 531 aaKnown RBP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 NAMPTP43490 491 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 EFNA5P52803 228 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 YARSP54577 528 aaKnown RBP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 HTR4Q13639 388 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 ZNF174Q15697 407 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 CDCA2Q69YH5 1023 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 DCLRE1AQ6PJP8 1040 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 CATSPER3Q86XQ3 398 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 GPR65Q8IYL9 337 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 SLC44A3Q8N4M1 653 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 SLC7A14Q8TBB6 771 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 ZNF707Q96C28 371 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 SHDQ96IW2 340 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-210ENST00000553779 RHOBTB2Q9BYZ6 727 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 TMEM60Q9H2L4 133 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 FBXW11Q9UKB1 542 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 SPTBN2O15020 2390 aa10.91□□□□□ -0.66
ACTN1-210ENST00000553779 KRBA1A5PL33 1030 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 CCDC169A6NNP5 214 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 WNT7AO00755 349 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 C1RP00736 705 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 DCNP07585 359 aaKnown RBP10.9□□□□□ -0.66
ACTN1-210ENST00000553779 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.66
ACTN1-210ENST00000553779 NPR3P17342 541 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-210ENST00000553779 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 GLRA4Q5JXX5 417 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 TTC38Q5R3I4 469 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-210ENST00000553779 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 KIFAP3Q92845 792 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 MTMR9Q96QG7 549 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 PAAF1Q9BRP4 392 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 CCDC94Q9BW85 323 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-210ENST00000553779 TOPORSQ9NS56 1045 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-210ENST00000553779 CDH7Q9ULB5 785 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 SIT1Q9Y3P8 196 aa10.9□□□□□ -0.66
ACTN1-210ENST00000553779 ACKR2O00590 384 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 PRRG1O14668 218 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 B3GAT3O94766 335 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 LRG1P02750 347 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 CYP11B2P19099 503 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 RPA1P27694 616 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 ELF1P32519 619 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 OR1D2P34982 312 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 MATR3P43243 847 aaKnown RBP eCLIP10.89□□□□□ -0.672e-6■■■■□ 26.1
ACTN1-210ENST00000553779 NTHL1P78549 312 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 FOXK2Q01167 660 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 DMP1Q13316 513 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-210ENST00000553779 UBXN2BQ14CS0 331 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
ACTN1-210ENST00000553779 ZNF568Q3ZCX4 644 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 PABPC1LQ4VXU2 614 aaKnown RBP10.89□□□□□ -0.67
ACTN1-210ENST00000553779 AXDND1Q5T1B0 1012 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-210ENST00000553779 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 GSTCDQ8NEC7 633 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 SNX29Q8TEQ0 813 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 ING5Q8WYH8 240 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 UROC1Q96N76 676 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 KXD1Q9BQD3 176 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 FZD8Q9H461 694 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 LRWD1Q9UFC0 647 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 USP20Q9Y2K6 914 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 NUB1Q9Y5A7 615 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 STK24Q9Y6E0 443 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 CDY1Q9Y6F8 540 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 R4GN57 208 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 SPAG17Q6Q759 2223 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 DMDP11532 3685 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 CACNA1AO00555 2505 aa10.89□□□□□ -0.67
ACTN1-210ENST00000553779 PHLPP2Q6ZVD8 1323 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 K7ERI5 159 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 PTGESO14684 152 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 EFEMP2O95967 443 aa10.88□□□□□ -0.67
ACTN1-210ENST00000553779 LMNAP02545 664 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms