RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ARMC9Q7Z3E5 817 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 STRA8Q7Z7C7 330 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 CABP7Q86V35 215 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 TEX2Q8IWB9 1127 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 ZC3H7AQ8IWR0 971 aaKnown RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 CPA5Q8WXQ8 436 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 PEX11GQ96HA9 241 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 CHAMP1Q96JM3 812 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 DEFB129Q9H1M3 183 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 BOLA2Q9H3K6 86 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 IPPKQ9H8X2 491 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 GPR108Q9NPR9 543 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 MARCH2Q9P0N8 246 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 SAMD15Q9P1V8 674 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 DBNLQ9UJU6 430 aaKnown RBP5.62□□□□□ -1.51
ATXN3-220ENST00000553491 COQ6Q9Y2Z9 468 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 X6R8D5 127 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 PASKQ96RG2 1323 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 FOCADQ5VW36 1801 aa5.62□□□□□ -1.51
ATXN3-220ENST00000553491 C22orf46C9J442 243 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 GOLIM4O00461 696 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 WNT9AO14904 365 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 ZNF609O15014 1411 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 SGSM2O43147 1006 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 GLRX3O76003 335 aaKnown RBP5.61□□□□□ -1.51
ATXN3-220ENST00000553491 INHBBP09529 407 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 PFKLP17858 780 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 FPR2P25090 351 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 GRK2P25098 689 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 GRK3P35626 688 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 FLT3P36888 993 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 ECE1P42892 770 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 GTF2A2P52657 109 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 NFKB2Q00653 900 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 AOX1Q06278 1338 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 TNFAIP1Q13829 316 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 VMACQ2NL98 169 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 SLC4A8Q2Y0W8 1093 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 CT47A1Q5JQC4 288 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-220ENST00000553491 PIK3R6Q5UE93 754 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 CDC42EP5Q6NZY7 148 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 HHIPL2Q6UWX4 724 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 CEP68Q76N32 757 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 MIGA2Q7L4E1 593 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 B3GNT8Q7Z7M8 397 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 RIOX2Q8IUF8 465 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 IGSF22Q8N9C0 903 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 ALG3Q92685 438 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 CAPNS2Q96L46 248 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 JAM3Q9BX67 310 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 TMEM39BQ9GZU3 492 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 PARD6AQ9NPB6 346 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 PIH1D3Q9NQM4 214 aaKnown RBP5.61□□□□□ -1.51
ATXN3-220ENST00000553491 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 DBR1Q9UK59 544 aaKnown RBP5.61□□□□□ -1.51
ATXN3-220ENST00000553491 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 ATP8A1Q9Y2Q0 1164 aa5.61□□□□□ -1.51
ATXN3-220ENST00000553491 WDR33Q9C0J8 1336 aaKnown RBP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 NPTXRO95502 500 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 BAG3O95817 575 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 PYGMP11217 842 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 BMP7P18075 431 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 HOXA5P20719 270 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 BTDP43251 543 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 DYNLL1P63167 89 aaKnown RBP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 MAP3K12Q12852 859 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 TTF1Q15361 905 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 TSHZ3Q63HK5 1081 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 RGMBQ6NW40 437 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 DDX53Q86TM3 631 aaKnown RBP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 DDX42Q86XP3 938 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 DNAJC5GQ8N7S2 189 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 MIGA1Q8NAN2 632 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 FNIP1Q8TF40 1166 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 TMEM169Q96HH4 297 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 WNK4Q96J92 1243 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 AATFQ9NY61 560 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-220ENST00000553491 OTOFQ9HC10 1997 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 MAST2Q6P0Q8 1798 aa5.6□□□□□ -1.51
ATXN3-220ENST00000553491 SALL1Q9NSC2 1324 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 ZNFX1Q9P2E3 1918 aaKnown RBP5.59□□□□□ -1.51
ATXN3-220ENST00000553491 MYH4Q9Y623 1939 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 CCDC66A2RUB6 948 aa5.59□□□□□ -1.51
ATXN3-220ENST00000553491 FAM47E-STBD1D6RA91 191 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms