RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 A0A087WWV3 80 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 LRRIQ4A6NIV6 560 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 USO1O60763 962 aaKnown RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 XYLBO75191 536 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 RECQL4O94761 1208 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 LYPLA2O95372 231 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 IGFBP6P24592 240 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 RARRES1P49788 294 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 PFKPQ01813 784 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 PABPC1LQ4VXU2 614 aaKnown RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 AXDND1Q5T1B0 1012 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 TSSK4Q6SA08 328 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 SLFN12Q8IYM2 578 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 ZBTB44Q8NCP5 570 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 PIGOQ8TEQ8 1089 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 ATRIPQ8WXE1 791 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 CCDC43Q96MW1 224 aaKnown RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 NAP1L4Q99733 375 aaKnown RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 HSD17B14Q9BPX1 270 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 OSBPL6Q9BZF3 934 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 ANKEF1Q9NU02 776 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 DNMT3BQ9UBC3 853 aaKnown RBP10.06□□□□□ -0.8
SYNE2-209ENST00000553308 CEP250Q9BV73 2442 aa10.06□□□□□ -0.8
SYNE2-209ENST00000553308 SHISA7A6NL88 538 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 LILRB5O75023 590 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 REC8O95072 547 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 BAG4O95429 457 aaKnown RBP10.05□□□□□ -0.8
SYNE2-209ENST00000553308 THP07101 528 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 POU2F2P09086 479 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 OR1D2P34982 312 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 ATXN1P54253 815 aaKnown RBP10.05□□□□□ -0.8
SYNE2-209ENST00000553308 SCRN1Q12765 414 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 NR5A1Q13285 461 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 RAB33AQ14088 237 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 NAB2Q15742 525 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 SLC5A9Q2M3M2 681 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 ZBTB41Q5SVQ8 909 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 POTEHQ6S545 545 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 RSPO2Q6UXX9 243 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-209ENST00000553308 PPP4R3CPQ6ZMV5 832 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 NELL1Q92832 810 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 CLDN23Q96B33 292 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 PLA2G2FQ9BZM2 168 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 EPC1Q9H2F5 836 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 PDZD7Q9H5P4 517 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 PRMT8Q9NR22 394 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-209ENST00000553308 HEBP1Q9NRV9 189 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 PRMT7Q9NVM4 692 aaPredicted RBP10.05□□□□□ -0.8
SYNE2-209ENST00000553308 ZSCAN32Q9NX65 697 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 SNTG2Q9NY99 539 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 USP20Q9Y2K6 914 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 CYP46A1Q9Y6A2 500 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 NCOR2Q9Y618 2525 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
SYNE2-209ENST00000553308 WNT7AO00755 349 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 N4BP3O15049 544 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 EDN1P05305 212 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 RHOP08100 348 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 CEBPBP17676 345 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 MAGEA9P43362 315 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 ELAVL2Q12926 359 aaKnown RBP10.04□□□□□ -0.8
SYNE2-209ENST00000553308 FZD5Q13467 585 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 GLRA4Q5JXX5 417 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 CDCA2Q69YH5 1023 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-209ENST00000553308 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-209ENST00000553308 NOSTRINQ8IVI9 506 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 BSNDQ8WZ55 320 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 MCRS1Q96EZ8 462 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 FZD8Q9H461 694 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-209ENST00000553308 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 CDV3Q9UKY7 258 aaKnown RBP10.04□□□□□ -0.8
SYNE2-209ENST00000553308 KCNH3Q9ULD8 1083 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 PCDHA12Q9UN75 941 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 MRPS23Q9Y3D9 190 aaKnown RBP10.04□□□□□ -0.8
SYNE2-209ENST00000553308 CDY1Q9Y6F8 540 aa10.04□□□□□ -0.8
SYNE2-209ENST00000553308 DCDC2BA2VCK2 349 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 I3L4J1 428 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 ECI2O75521 394 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 CDKL5O76039 1030 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 COL4A2P08572 1712 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 XBP1P17861 261 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 LIG1P18858 919 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 FGFR3P22607 806 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 TGM1P22735 817 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 TKTP29401 623 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 RPS9P46781 194 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 LMNB2Q03252 620 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 DNAH14Q0VDD8 3507 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 MTAPQ13126 283 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 PRPF4BQ13523 1007 aaKnown RBP10.03□□□□□ -0.8
SYNE2-209ENST00000553308 GRM2Q14416 872 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 CALCRLQ16602 461 aa10.03□□□□□ -0.8
SYNE2-209ENST00000553308 FAM187BQ17R55 369 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms