RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 C2orf16Q68DN1 1984 aa10.35□□□□□ -0.75
CHD8-203ENST00000553283 ADAM12O43184 909 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 C8AP07357 584 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 OR52Z1P0C646 297 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 LIG1P18858 919 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 MUTP22033 750 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 HOXA9P31269 272 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 RBM25P49756 843 aaKnown RBP10.34□□□□□ -0.75
CHD8-203ENST00000553283 EFNA5P52803 228 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 NTHL1P78549 312 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 GUCY1B3Q02153 619 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 ST3GAL1Q11201 340 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 ORC2Q13416 577 aaPredicted RBP10.34□□□□□ -0.75
CHD8-203ENST00000553283 RAB33AQ14088 237 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 PPP2R5AQ15172 486 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 DCAF4L1Q3SXM0 396 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 EEF1DP3Q658K8 133 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 DCLRE1AQ6PJP8 1040 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 PARM1Q6UWI2 310 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
CHD8-203ENST00000553283 ST13P5Q8NFI4 369 aaPredicted RBP10.34□□□□□ -0.75
CHD8-203ENST00000553283 RPP25Q9BUL9 199 aaKnown RBP10.34□□□□□ -0.75
CHD8-203ENST00000553283 ARHGEF3Q9NR81 526 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 GDAQ9Y2T3 454 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 SIT1Q9Y3P8 196 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 ZNF292O60281 2723 aa10.34□□□□□ -0.75
CHD8-203ENST00000553283 ARID2Q68CP9 1835 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 TMEM189-UBE2V1I3L0A0 370 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 CCL16O15467 120 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 EIF5BO60841 1220 aaKnown RBP10.33□□□□□ -0.76
CHD8-203ENST00000553283 XYLBO75191 536 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 EDN1P05305 212 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 POU2F2P09086 479 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 FGFR3P22607 806 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 OR1D2P34982 312 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 STARD6P59095 220 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 GPC5P78333 572 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 SPECC1Q5M775 1068 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 NT5DC1Q5TFE4 455 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 RTL10Q7L3V2 364 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 KCNG4Q8TDN1 519 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 KIFAP3Q92845 792 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 FGF13Q92913 245 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 FGF14Q92915 247 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 SHDQ96IW2 340 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 C8orf76Q96K31 380 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 IFT74Q96LB3 600 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 PPP1R10Q96QC0 940 aaKnown RBP10.33□□□□□ -0.76
CHD8-203ENST00000553283 KIFC3Q9BVG8 833 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 FOXP1Q9H334 677 aaPredicted RBP10.33□□□□□ -0.76
CHD8-203ENST00000553283 POLD4Q9HCU8 107 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 DLGAP2Q9P1A6 1054 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 MTRRQ9UBK8 725 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 DOCK8Q8NF50 2099 aa10.33□□□□□ -0.76
CHD8-203ENST00000553283 TDRD15B5MCY1 1934 aaKnown RBP10.33□□□□□ -0.76
CHD8-203ENST00000553283 K7ERI5 159 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 TRAPPC3O43617 180 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 B3GAT3O94766 335 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 LMNAP02545 664 aaKnown RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 DCNP07585 359 aaKnown RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 IGFBP6P24592 240 aaPredicted RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 CCT6AP40227 531 aaKnown RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD8-203ENST00000553283 CLCNKBP51801 687 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 ECM1Q16610 540 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 UPP1Q16831 310 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 TTC38Q5R3I4 469 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 ATF7IP2Q5U623 682 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 HAUS3Q68CZ6 603 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 CD300LGQ6UXG3 332 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 RSPO2Q6UXX9 243 aaPredicted RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 MTSS1LQ765P7 747 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 APBB1IPQ7Z5R6 666 aaPredicted RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 C1orf210Q8IVY1 113 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 C4orf32Q8N8J7 132 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 ITFG1Q8TB96 612 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 SLC7A14Q8TBB6 771 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 UROC1Q96N76 676 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 BHMT2Q9H2M3 363 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 DNMT3BQ9UBC3 853 aaKnown RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 KCNH3Q9ULD8 1083 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 POLIQ9UNA4 740 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 LIMCH1Q9UPQ0 1083 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 KIAA1024Q9UPX6 916 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 TNFSF13BQ9Y275 285 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 BACE2Q9Y5Z0 518 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 MTCL1Q9Y4B5 1905 aaKnown RBP10.32□□□□□ -0.76
CHD8-203ENST00000553283 MYO15AQ9UKN7 3530 aa10.32□□□□□ -0.76
CHD8-203ENST00000553283 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
CHD8-203ENST00000553283 NEFLP07196 543 aa10.31□□□□□ -0.76
CHD8-203ENST00000553283 SP9P0CG40 484 aa10.31□□□□□ -0.76
CHD8-203ENST00000553283 GLULP15104 373 aa10.31□□□□□ -0.76
CHD8-203ENST00000553283 TRAPPC10P48553 1259 aa10.31□□□□□ -0.76
CHD8-203ENST00000553283 SNW1Q13573 536 aaKnown RBP10.31□□□□□ -0.76
CHD8-203ENST00000553283 PDIA5Q14554 519 aa10.31□□□□□ -0.76
CHD8-203ENST00000553283 PABPC1LQ4VXU2 614 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms