RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CLUL1Q15846 466 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 SLC10A6Q3KNW5 377 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 ANKRD54Q6NXT1 300 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 ZNF720Q7Z2F6 126 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 RASSF8Q8NHQ8 419 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 KLHL5Q96PQ7 755 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 CNTN3Q9P232 1028 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 STYXL1Q9Y6J8 313 aa21.12■□□□□ 0.97
PTCH1-227ENST00000553256 TRIP11Q15643 1979 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 TMEM189-UBE2V1I3L0A0 370 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 KIF4AO95239 1232 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 CNPP09543 421 aaKnown RBP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 TXLNAP40222 546 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 ZP2Q05996 745 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 STRN3Q13033 797 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 HSP90AA2PQ14568 343 aaPredicted RBP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 NOLC1Q14978 699 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 TMEM132AQ24JP5 1023 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 FOXD4L6Q3SYB3 417 aaPredicted RBP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 GLRA4Q5JXX5 417 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 FUT10Q6P4F1 479 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 CNNM4Q6P4Q7 775 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 FOXD4L3Q6VB84 417 aaPredicted RBP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 SV2BQ7L1I2 683 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 DYMQ7RTS9 669 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 ZBTB33Q86T24 672 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 FEZF2Q8TBJ5 459 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 KCNG4Q8TDN1 519 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 KHSRPQ92945 711 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTCH1-227ENST00000553256 RPS6KC1Q96S38 1066 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 COLEC11Q9BWP8 271 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 FGFBP2Q9BYJ0 223 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 ADAM28Q9UKQ2 775 aa21.11■□□□□ 0.97
PTCH1-227ENST00000553256 A0A0B4J269 797 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 CASTOR2A6NHX0 329 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 K7ENM7 598 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 PAPLNO95428 1278 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 UPP1Q16831 310 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 ZC2HC1CQ53FD0 456 aaPredicted RBP21.1■□□□□ 0.97
PTCH1-227ENST00000553256 EP400NLQ6ZTU2 488 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 APBB1IPQ7Z5R6 666 aaPredicted RBP21.1■□□□□ 0.97
PTCH1-227ENST00000553256 SFR1Q86XK3 245 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 C3orf58Q8NDZ4 430 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 IKZF4Q9H2S9 585 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 OLFML3Q9NRN5 406 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 PRKAG3Q9UGI9 489 aa21.1■□□□□ 0.97
PTCH1-227ENST00000553256 TBCAO75347 108 aaKnown RBP21.09■□□□□ 0.97
PTCH1-227ENST00000553256 STAT6P42226 847 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 CLCN4P51793 760 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 OSTNP61366 133 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 ZBTB6Q15916 424 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 SEZ6Q53EL9 994 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 ZBTB41Q5SVQ8 909 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 RESP18Q5W5W9 173 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 PDILTQ8N807 584 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 ACAP3Q96P50 834 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 CCDC94Q9BW85 323 aaPredicted RBP21.09■□□□□ 0.97
PTCH1-227ENST00000553256 SEL1LQ9UBV2 794 aa21.09■□□□□ 0.97
PTCH1-227ENST00000553256 USP15Q9Y4E8 981 aaPredicted RBP21.09■□□□□ 0.97
PTCH1-227ENST00000553256 TTC26A0AVF1 554 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 TISP43B9A030 160 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 ANKRD63C9JTQ0 380 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 CLDN3O15551 220 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 KRT18P05783 430 aaKnown RBP21.08■□□□□ 0.97
PTCH1-227ENST00000553256 EPCAMP16422 314 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 ADSSP30520 456 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 TNFSF9P41273 254 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 CASP5P51878 434 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 KCNA1Q09470 495 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 RTP2Q5QGT7 225 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 ADHFE1Q8IWW8 467 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 B3GALT6Q96L58 329 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 TNMDQ9H2S6 317 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 GOLGA2P5Q9HBQ8 144 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 ANKFY1Q9P2R3 1169 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 CFAP45Q9UL16 551 aa21.08■□□□□ 0.97
PTCH1-227ENST00000553256 TEX28O15482 410 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 NR1I2O75469 434 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 HOXB8P17481 243 aaPredicted RBP21.07■□□□□ 0.96
PTCH1-227ENST00000553256 GAP43P17677 238 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 GLUD2P49448 558 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 CLCNKBP51801 687 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 EHHADHQ08426 723 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 LLGL2Q6P1M3 1020 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 LEO1Q8WVC0 666 aaPredicted RBP21.07■□□□□ 0.96
PTCH1-227ENST00000553256 CASP10Q92851 521 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 TCHPQ9BT92 498 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 TRIM9Q9C026 710 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 CUEDC2Q9H467 287 aa21.07■□□□□ 0.96
PTCH1-227ENST00000553256 MRPL17Q9NRX2 175 aaKnown RBP21.07■□□□□ 0.96
PTCH1-227ENST00000553256 TOPORSQ9NS56 1045 aaPredicted RBP21.07■□□□□ 0.96
PTCH1-227ENST00000553256 C1RP00736 705 aa21.06■□□□□ 0.96
PTCH1-227ENST00000553256 CLTAP09496 248 aa21.06■□□□□ 0.96
PTCH1-227ENST00000553256 ABCD1P33897 745 aa21.06■□□□□ 0.96
PTCH1-227ENST00000553256 ENOX2Q16206 610 aaKnown RBP21.06■□□□□ 0.96
PTCH1-227ENST00000553256 USP41Q3LFD5 358 aa21.06■□□□□ 0.96
PTCH1-227ENST00000553256 LILRA6Q6PI73 481 aa21.06■□□□□ 0.96
PTCH1-227ENST00000553256 DCLRE1AQ6PJP8 1040 aa21.06■□□□□ 0.96
PTCH1-227ENST00000553256 TMEM130Q8N3G9 435 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms