RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 A0A087WZ62 844 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 CXCL8P10145 99 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 KITP10721 976 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ITGB3BPQ13352 177 aaPredicted RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 DNAAF3Q8N9W5 541 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 TCP11Q8WWU5 503 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ARHGEF2Q92974 986 aaKnown RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 FDXACB1Q9BRP7 624 aaPredicted RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 SUDS3Q9H7L9 328 aaPredicted RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 INTUQ9ULD6 942 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 TELO2Q9Y4R8 837 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 MYBL2P10244 700 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ITIH3Q06033 890 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 RFFLQ8WZ73 363 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 SLC35C1Q96A29 364 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ARL8AQ96BM9 186 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 SCAMP3O14828 347 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 PRPSAP2O60256 369 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 TUBBP07437 444 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 MYL6P60660 151 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 DMTNQ08495 405 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 EML3Q32P44 896 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 ZNF449Q6P9G9 518 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 MRPL4Q9BYD3 311 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 DHX35Q9H5Z1 703 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 ABCF3Q9NUQ8 709 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 ZNF446Q9NWS9 450 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 POLR2BP30876 1174 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 BEX3Q00994 111 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 TTC31Q49AM3 519 aaPredicted RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 NT5DC1Q5TFE4 455 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 OSMRQ99650 979 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 PRDM5Q9NQX1 630 aaPredicted RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 BCL9LQ86UU0 1499 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 EXOC1LA0A1B0GW35 172 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 CTIFO43310 598 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 MARCKSL1P49006 195 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 TBX2Q13207 712 aaPredicted RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 PWWP2AQ96N64 755 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 DNAJC7Q99615 494 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 WRAP73Q9P2S5 460 aaPredicted RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 REXO2Q9Y3B8 237 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 RASGRF2O14827 1237 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 HMBSP08397 361 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 KRT17Q04695 432 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 RCN2Q14257 317 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 DUOXA2Q1HG44 320 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 ANKZF1Q9H8Y5 726 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 ATP2A2P16615 1042 aaKnown RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 CYP2C19P33261 490 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 BCAR1P56945 870 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 TRIM7Q9C029 511 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
TGFBR1-209ENST00000552516 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 EPHX2P34913 555 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 TNFSF9P41273 254 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ARHGAP25P42331 645 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ZBED8Q8IZ13 594 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 OATP04181 439 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 VIL1P09327 827 aaKnown RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 CDH6P55285 790 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 KYNUQ16719 465 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ATP13A4Q4VNC1 1196 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 RMDN2Q96LZ7 410 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 NSRP1Q9H0G5 558 aaKnown RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 SALL4Q9UJQ4 1053 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 GRID2IPA4D2P6 1211 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 NAB2Q15742 525 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 GNASQ5JWF2 1037 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 BEND6Q5SZJ8 279 aaPredicted RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 CPNE8Q86YQ8 564 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 NEK9Q8TD19 979 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 KRT35Q92764 455 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 RIT2Q99578 217 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 DNAI2Q9GZS0 605 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ITIH6Q6UXX5 1313 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 KIF1AQ12756 1690 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 BPIFB4P59827 614 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 ZBTB41Q5SVQ8 909 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 C4orf33Q8N1A6 199 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 GMCL1P1Q8NEA9 526 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 IQCDQ96DY2 449 aa11.47□□□□□ -0.57
TGFBR1-209ENST00000552516 PBKQ96KB5 322 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms