RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 PRDM12Q9H4Q4 367 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 PCIF1Q9H4Z3 704 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 PLEKHA5Q9HAU0 1116 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 CNTN3Q9P232 1028 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 MAN1B1Q9UKM7 699 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 PLAGL2Q9UPG8 496 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 MAPK8IP1Q9UQF2 711 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 CITO14578 2027 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 TDRD15B5MCY1 1934 aaKnown RBP20.32■□□□□ 0.84
DDX54-209ENST00000551912 B4GALT3O60512 393 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 MBD3O95983 291 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 MCM4P33991 863 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 PBX3P40426 434 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 POU5F1Q01860 360 aaKnown RBP20.32■□□□□ 0.84
DDX54-209ENST00000551912 PPP2R3AQ06190 1150 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 DSC1Q08554 894 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 ENOX2Q16206 610 aaKnown RBP20.32■□□□□ 0.84
DDX54-209ENST00000551912 GLRA4Q5JXX5 417 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 COLGALT2Q8IYK4 626 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 SMYD4Q8IYR2 804 aaPredicted RBP20.32■□□□□ 0.84
DDX54-209ENST00000551912 FAM213AQ9BRX8 229 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 TMEM175Q9BSA9 504 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 NUP62CLQ9H1M0 184 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 KCTD10Q9H3F6 313 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 DNAJB4Q9UDY4 337 aa20.32■□□□□ 0.84
DDX54-209ENST00000551912 SMIM28A0A1B0GU29 152 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 TTC26A0AVF1 554 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 H3BNC9 293 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 RFXAPO00287 272 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 PDXKO00764 312 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 CLIC2O15247 247 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 MEFVO15553 781 aaPredicted RBP20.31■□□□□ 0.84
DDX54-209ENST00000551912 EXTL3O43909 919 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 ALDH2P05091 517 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 GALTP07902 379 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 KCNE1P15382 129 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 PPM1AP35813 382 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 TUSC3Q13454 348 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 GPM6BQ13491 265 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 C12orf56Q8IXR9 622 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 GPD1LQ8N335 351 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 KLHL23Q8NBE8 558 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 GDPD5Q8WTR4 605 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 PPP1R10Q96QC0 940 aaKnown RBP20.31■□□□□ 0.84
DDX54-209ENST00000551912 SLC38A7Q9NVC3 462 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 MTMR10Q9NXD2 777 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 SPG21Q9NZD8 308 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 HSPBP1Q9NZL4 362 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 KIAA1468Q9P260 1216 aa20.31■□□□□ 0.84
DDX54-209ENST00000551912 TRIP11Q15643 1979 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 GOLGA8IPA6NC78 632 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 GOLGA8JA6NMD2 632 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 LACTBL1A8MY62 500 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 PRCPP42785 496 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 SLC11A1P49279 550 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 COBLL1Q53SF7 1204 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 ISM2Q6H9L7 571 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 CRELD2Q6UXH1 353 aaPredicted RBP20.3■□□□□ 0.84
DDX54-209ENST00000551912 CD302Q8IX05 232 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 SLC39A11Q8N1S5 342 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 ZSWIM2Q8NEG5 633 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 NOC3LQ8WTT2 800 aaKnown RBP20.3■□□□□ 0.84
DDX54-209ENST00000551912 FAM212AQ96EL1 285 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 ZMAT2Q96NC0 199 aaKnown RBP20.3■□□□□ 0.84
DDX54-209ENST00000551912 GUCD1Q96NT3 240 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 CDX2Q99626 313 aaPredicted RBP20.3■□□□□ 0.84
DDX54-209ENST00000551912 KIAA1586Q9HCI6 787 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 FAN1Q9Y2M0 1017 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 TRANK1O15050 2925 aa20.3■□□□□ 0.84
DDX54-209ENST00000551912 NT5C1B-RDH14C9J2C7 533 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 BIN1O00499 593 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 NRP1O14786 923 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 CALUO43852 315 aaPredicted RBP20.29■□□□□ 0.84
DDX54-209ENST00000551912 FGF18O76093 207 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 ITGB1P05556 798 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 ADRB2P07550 413 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 OR1G1P47890 313 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 CYP2J2P51589 502 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 MORC3Q14149 939 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 HSP90AA2PQ14568 343 aaPredicted RBP20.29■□□□□ 0.84
DDX54-209ENST00000551912 NAB2Q15742 525 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 TRIML1Q8N9V2 468 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 TSPAN18Q96SJ8 248 aa20.29■□□□□ 0.84
DDX54-209ENST00000551912 GAS2L1Q99501 681 aaPredicted RBP20.29■□□□□ 0.84
DDX54-209ENST00000551912 CASTOR2A6NHX0 329 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 LPXNO60711 386 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 IL18RAPO95256 599 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 PLCB3Q01970 1234 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 KRT17Q04695 432 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 STIM1Q13586 685 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 BRSK2Q8IWQ3 736 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 XXYLT1Q8NBI6 393 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 KIF12Q96FN5 646 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 TMEM169Q96HH4 297 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 FBXL18Q96ME1 805 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 ASB7Q9H672 318 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 ALG13Q9NP73 1137 aaKnown RBP20.28■□□□□ 0.84
DDX54-209ENST00000551912 RBAKQ9NYW8 714 aaPredicted RBP20.28■□□□□ 0.84
DDX54-209ENST00000551912 TRAF3IP3Q9Y228 551 aa20.28■□□□□ 0.84
DDX54-209ENST00000551912 PRG3Q9Y2Y8 225 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms