RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, human

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK4-209	ENST00000551800	FRMD5	Q7Z6J6	570 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	CCDC105	Q8IYK2	499 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	KCNG4	Q8TDN1	519 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	SNX29	Q8TEQ0	813 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	PAAF1	Q9BRP4	392 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	BHMT2	Q9H2M3	363 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	FZD8	Q9H461	694 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	TOPORS	Q9NS56	1045 aa	Predicted RBP	18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	WNT16	Q9UBV4	365 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	FBXW11	Q9UKB1	542 aa		18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.82	■□□□□ 0.6
CDK4-209	ENST00000551800	PHLPP2	Q6ZVD8	1323 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	PRR23A	A6NEV1	266 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	CCDC169	A6NNP5	214 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	TRAPPC3	O43617	180 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	N4BP1	O75113	896 aa	Known RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	CYP11B2	P19099	503 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	RBM25	P49756	843 aa	Known RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	ST3GAL1	Q11201	340 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	GLRA4	Q5JXX5	417 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	MTSS1L	Q765P7	747 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	DTWD2	Q8NBA8	298 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	GSTCD	Q8NEC7	633 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	PIK3R5	Q8WYR1	880 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	ZNF707	Q96C28	371 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	LLPH	Q9BRT6	129 aa	Known RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	CCDC94	Q9BW85	323 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	TBC1D17	Q9HA65	648 aa		18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	DAXX	Q9UER7	740 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK4-209	ENST00000551800	TICRR	Q7Z2Z1	1910 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	PROB1	E7EW31	1015 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800		K7ERI5	159 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	CCL16	O15467	120 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	LAMP2	P13473	410 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	DMP1	Q13316	513 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	ZNF568	Q3ZCX4	644 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	SLC7A14	Q8TBB6	771 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	GPR152	Q8TDT2	470 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	BSND	Q8WZ55	320 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	UROC1	Q96N76	676 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	KIFC3	Q9BVG8	833 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	ARHGEF3	Q9NR81	526 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	DDX19A	Q9NUU7	478 aa	Known RBP	18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	KIAA1024	Q9UPX6	916 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	KIF3A	Q9Y496	699 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	NUMBL	Q9Y6R0	609 aa		18.8	■□□□□ 0.6
CDK4-209	ENST00000551800	PTGES	O14684	152 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	B3GAT3	O94766	335 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	EFEMP2	O95967	443 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	TRAPPC10	P48553	1259 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	KRT79	Q5XKE5	535 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	ZC3H14	Q6PJT7	736 aa	Known RBP	18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	ASCL5	Q7RTU5	278 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	SLC44A3	Q8N4M1	653 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	HINFP	Q9BQA5	517 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	CCDC113	Q9H0I3	377 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	NOTCH4	Q99466	2003 aa		18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	ZNF638	Q14966	1978 aa	Known RBP	18.79	■□□□□ 0.6
CDK4-209	ENST00000551800	PI15	O43692	258 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	HARS	P12081	509 aa	Known RBP	18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	ELF1	P32519	619 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	OR1D2	P34982	312 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	FXR2	P51116	673 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	ZRSR1	Q15695	479 aa	Known RBP	18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	SHD	Q96IW2	340 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	DRC1	Q96MC2	740 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	TCHP	Q9BT92	498 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	USP20	Q9Y2K6	914 aa		18.78	■□□□□ 0.6
CDK4-209	ENST00000551800	TTLL13P	A6NNM8	815 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	LRG1	P02750	347 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	NPR3	P17342	541 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	HOXA9	P31269	272 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	MATR3	P43243	847 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	PEX3	P56589	373 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	OSTN	P61366	133 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	HTR4	Q13639	388 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	EEF1DP3	Q658K8	133 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	LILRA6	Q6PI73	481 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	DCLRE1A	Q6PJP8	1040 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	LNX1	Q8TBB1	728 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	CLSTN3	Q9BQT9	956 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	MRPL4	Q9BYD3	311 aa	Known RBP	18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	KMT5A	Q9NQR1	393 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	SLC38A7	Q9NVC3	462 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	CDH7	Q9ULB5	785 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	DNM3	Q9UQ16	869 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	NUB1	Q9Y5A7	615 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	CDY1	Q9Y6F8	540 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	FAM186A	A6NE01	2351 aa		18.77	■□□□□ 0.6
CDK4-209	ENST00000551800	KRBA1	A5PL33	1030 aa		18.76	■□□□□ 0.59
CDK4-209	ENST00000551800	CLCNKB	P51801	687 aa		18.76	■□□□□ 0.59
CDK4-209	ENST00000551800	STRN3	Q13033	797 aa		18.76	■□□□□ 0.59
CDK4-209	ENST00000551800	PABPC1L	Q4VXU2	614 aa	Known RBP	18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms