RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PTPN2P17706 415 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 AKAP5P24588 427 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 SPIRE1Q08AE8 756 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 KRT32Q14532 448 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 EMC2Q15006 297 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 ACAP1Q15027 740 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 SLC27A1Q6PCB7 646 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 C4orf19Q8IY42 314 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 SPEM1Q8N4L4 309 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 RABGGTAQ92696 567 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 ESYT1Q9BSJ8 1104 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 SLKQ9H2G2 1235 aaPredicted RBP16.99■□□□□ 0.31
CACNB3-220ENST00000551716 NXF3Q9H4D5 531 aaKnown RBP16.99■□□□□ 0.31
CACNB3-220ENST00000551716 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 PARP2Q9UGN5 583 aa16.99■□□□□ 0.31
CACNB3-220ENST00000551716 RALYQ9UKM9 306 aaKnown RBP16.99■□□□□ 0.31
CACNB3-220ENST00000551716 F5P12259 2224 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 ZNF197O14709 1029 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 PAPSS2O95340 614 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 RHOP08100 348 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 YWHABP31946 246 aaKnown RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 OR1D2P34982 312 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 NLRP5P59047 1200 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 TSGA10IPQ3SY00 556 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 AASDHQ4L235 1098 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 C12orf50Q8NA57 414 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 ZNF579Q8NAF0 562 aaKnown RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 TCEANC2Q96MN5 208 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 MTRQ99707 1265 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 RNF26Q9BY78 433 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-220ENST00000551716 NFKBIZQ9BYH8 718 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 WDR81Q562E7 1941 aa16.98■□□□□ 0.31
CACNB3-220ENST00000551716 CEP295Q9C0D2 2601 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 TM4SF5O14894 197 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 ARF4P18085 180 aaPredicted RBP16.97■□□□□ 0.31
CACNB3-220ENST00000551716 LRRC32Q14392 662 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 XKR9Q5GH70 373 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 CEP68Q76N32 757 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 MSANTD3Q96H12 275 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 LOXL4Q96JB6 756 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 ZNF334Q9HCZ1 680 aaPredicted RBP16.97■□□□□ 0.31
CACNB3-220ENST00000551716 KLK14Q9P0G3 267 aa16.97■□□□□ 0.31
CACNB3-220ENST00000551716 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
CACNB3-220ENST00000551716 DDX25Q9UHL0 483 aaKnown RBP16.97■□□□□ 0.31
CACNB3-220ENST00000551716 CHURC1-FNTBB4DL54 471 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 EML1O00423 815 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 ADAM12O43184 909 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 TDP2O95551 362 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 LRG1P02750 347 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 THP07101 528 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 CHRNB1P11230 501 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 PSMC3P17980 439 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 HOXA6P31267 233 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 FNTBP49356 437 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 SATB1Q01826 763 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 MBTD1Q05BQ5 628 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 MAP4K3Q8IVH8 894 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 FAM160A2Q8N612 972 aaPredicted RBP16.96■□□□□ 0.31
CACNB3-220ENST00000551716 PAAF1Q9BRP4 392 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 PCDHA4Q9UN74 947 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 BACE2Q9Y5Z0 518 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 PIAS3Q9Y6X2 628 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 COL4A3Q01955 1670 aa16.96■□□□□ 0.31
CACNB3-220ENST00000551716 CASTOR2A6NHX0 329 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 TRAPPC3O43617 180 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 KIF4AO95239 1232 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 NPTXRO95502 500 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 ZNF806P0C7X5 589 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 FGFR3P22607 806 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 ELF1P32519 619 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 EPHA7Q15375 998 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 AMHR2Q16671 573 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 FAM78AQ5JUQ0 283 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 ANKS3Q6ZW76 656 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 HASPINQ8TF76 798 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 DEPDC1BQ8WUY9 529 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 MTRRQ9UBK8 725 aa16.95■□□□□ 0.3
CACNB3-220ENST00000551716 DOCK6Q96HP0 2047 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 ARHGEF37A1IGU5 675 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 ZNF263O14978 683 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 GDI1P31150 447 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 PTGDRQ13258 359 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 GRM2Q14416 872 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 SLC5A9Q2M3M2 681 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 DGKKQ5KSL6 1271 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 CYP4A22Q5TCH4 519 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 GALNT17Q6IS24 598 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CACNB3-220ENST00000551716 ZNF461Q8TAF7 563 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 SMARCD2Q92925 531 aa16.94■□□□□ 0.3
CACNB3-220ENST00000551716 E2F7Q96AV8 911 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms