RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 RSPO2Q6UXX9 243 aaPredicted RBP19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 PIK3R5Q8WYR1 880 aa19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 NKD2Q969F2 451 aaPredicted RBP19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.76■□□□□ 0.75
PRPF40B-215ENST00000551418 WDR87Q6ZQQ6 2873 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 ARHGEF35A5YM69 484 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 ACKR2O00590 384 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 N4BP3O15049 544 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 CCL16O15467 120 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 DCNP07585 359 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 FSHRP23945 695 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 RPA1P27694 616 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 PSMD5Q16401 504 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 TMEM132AQ24JP5 1023 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 GLRA4Q5JXX5 417 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 SPECC1Q5M775 1068 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 PARM1Q6UWI2 310 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 ADSSL1Q8N142 457 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 ITFG1Q8TB96 612 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 FGF14Q92915 247 aa19.75■□□□□ 0.75
PRPF40B-215ENST00000551418 GVINP1Q7Z2Y8 2422 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 LRRN2O75325 713 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 GPC5P78333 572 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 MAPK6Q16659 721 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 CCDC83Q8IWF9 413 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 C4orf32Q8N8J7 132 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 DEPTORQ8TB45 409 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 NXPE3Q969Y0 559 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 C2orf40Q9H1Z8 148 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 GOLGA2P5Q9HBQ8 144 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 HCFC1R1Q9NWW0 138 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 DLGAP2Q9P1A6 1054 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 CACNA1IQ9P0X4 2223 aa19.74■□□□□ 0.75
PRPF40B-215ENST00000551418 I3L4J1 428 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 C8AP07357 584 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 GLULP15104 373 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 NAMPTP43490 491 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 POTEHQ6S545 545 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 FOXQ1Q9C009 403 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 POLIQ9UNA4 740 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 R4GN57 208 aa19.73■□□□□ 0.75
PRPF40B-215ENST00000551418 EP300Q09472 2414 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 OR1D2P34982 312 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 CLCNKBP51801 687 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 CREMQ03060 361 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 PPM1LQ5SGD2 360 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 CEP120Q8N960 986 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 C3orf58Q8NDZ4 430 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 FGF13Q92913 245 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 C8orf76Q96K31 380 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 PPP1R10Q96QC0 940 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 BHMT2Q9H2M3 363 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 ARHGEF3Q9NR81 526 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 SLC2A4RGQ9NR83 387 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 CDH7Q9ULB5 785 aa19.72■□□□□ 0.75
PRPF40B-215ENST00000551418 FGFR3P22607 806 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 RFX1P22670 979 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 CCT6AP40227 531 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 BRCC3P46736 316 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 SOX4Q06945 474 aaPredicted RBP19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 SAFBQ15424 915 aaKnown RBP eCLIP19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 TTC38Q5R3I4 469 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 AXDND1Q5T1B0 1012 aaPredicted RBP19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 LIN9Q5TKA1 542 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 DCLRE1AQ6PJP8 1040 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 SLC7A14Q8TBB6 771 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 ADPGKQ9BRR6 497 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 DNMT3BQ9UBC3 853 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 KIAA1024Q9UPX6 916 aa19.71■□□□□ 0.75
PRPF40B-215ENST00000551418 B3GAT3O94766 335 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 HNRNPA1P09651 372 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 TKTP29401 623 aaKnown RBP19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 RAB33AQ14088 237 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 ATF7IP2Q5U623 682 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 PHLDB3Q6NSJ2 640 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 ERMNQ8TAM6 284 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 LIMCH1Q9UPQ0 1083 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 SIT1Q9Y3P8 196 aa19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 MTF2Q9Y483 593 aaPredicted RBP19.7■□□□□ 0.74
PRPF40B-215ENST00000551418 PP2D1A8MPX8 630 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 TOB1P50616 345 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 OSTNP61366 133 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 SNW1Q13573 536 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 DAW1Q8N136 415 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 FBXO18Q8NFZ0 1043 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 ING5Q8WYH8 240 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 KXD1Q9BQD3 176 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 FOXP1Q9H334 677 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 DDX19AQ9NUU7 478 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 MTRRQ9UBK8 725 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 CDY1Q9Y6F8 540 aa19.69■□□□□ 0.74
PRPF40B-215ENST00000551418 ZNF292O60281 2723 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 SMIM28A0A1B0GU29 152 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 E9PMD0 336 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 MEFVO15553 781 aaPredicted RBP19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 CDC25AP30304 524 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 FXR2P51116 673 aaKnown RBP eCLIP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms