RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TMEM130Q8N3G9 435 aa21.27■■□□□ 1
SSH1-209ENST00000551165 U2AF1L4Q8WU68 220 aaKnown RBP21.27■■□□□ 1
SSH1-209ENST00000551165 TRIB2Q92519 343 aa21.27■■□□□ 1
SSH1-209ENST00000551165 NT5C1BQ96P26 610 aa21.27■■□□□ 1
SSH1-209ENST00000551165 FAM49AQ9H0Q0 323 aaPredicted RBP21.27■■□□□ 1
SSH1-209ENST00000551165 MYH10P35580 1976 aa21.27■□□□□ 0.99
SSH1-209ENST00000551165 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 OGTO15294 1046 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 TMOD1P28289 359 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 PHKA2P46019 1235 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 TRIM32Q13049 653 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 BIRC3Q13489 604 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 ZNF568Q3ZCX4 644 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 BRSK2Q8IWQ3 736 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 NLRP7Q8WX94 980 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 HHIPL1Q96JK4 782 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 CDT1Q9H211 546 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 CPSF3Q9UKF6 684 aaKnown RBP21.26■□□□□ 0.99
SSH1-209ENST00000551165 TMCO5BA8MYB1 307 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 GPR25O00155 361 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 SGPL1O95470 568 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 MYL3P08590 195 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 LACTBP83111 547 aaPredicted RBP21.26■□□□□ 0.99
SSH1-209ENST00000551165 ZNF200P98182 395 aaPredicted RBP21.26■□□□□ 0.99
SSH1-209ENST00000551165 AMPD2Q01433 879 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 ENPEPQ07075 957 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 NAB2Q15742 525 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 NFRKBQ6P4R8 1299 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 CGRRF1Q99675 332 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 NFKBIZQ9BYH8 718 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 CDHR5Q9HBB8 845 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 TAS2R14Q9NYV8 317 aa21.26■□□□□ 0.99
SSH1-209ENST00000551165 CYP26A1O43174 497 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 FLT3LGP49771 235 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 NCBP1Q09161 790 aaKnown RBP21.25■□□□□ 0.99
SSH1-209ENST00000551165 MFSD10Q14728 455 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 KIZQ2M2Z5 673 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 RUFY4Q6ZNE9 571 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 SHC3Q92529 594 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 GINS2Q9Y248 185 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 SRGAP2O75044 1071 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 FAM71AQ8IYT1 594 aa21.25■□□□□ 0.99
SSH1-209ENST00000551165 APOBEC3GQ9HC16 384 aaKnown RBP21.25■□□□□ 0.99
SSH1-209ENST00000551165 MEFVO15553 781 aaPredicted RBP21.24■□□□□ 0.99
SSH1-209ENST00000551165 CST3P01034 146 aaPredicted RBP21.24■□□□□ 0.99
SSH1-209ENST00000551165 PIK3CAP42336 1068 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 FCGRTP55899 365 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 PRKCZQ05513 592 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 IRF5Q13568 498 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 BMS1Q14692 1282 aaKnown RBP21.24■□□□□ 0.99
SSH1-209ENST00000551165 SLC47A2Q86VL8 602 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 ERO1AQ96HE7 468 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 PRMT7Q9NVM4 692 aaPredicted RBP21.24■□□□□ 0.99
SSH1-209ENST00000551165 TNFSF13BQ9Y275 285 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 ARF4P18085 180 aaPredicted RBP21.24■□□□□ 0.99
SSH1-209ENST00000551165 MFAP3P55082 362 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 POU5F1BQ06416 359 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 IFNLR1Q8IU57 520 aaPredicted RBP21.24■□□□□ 0.99
SSH1-209ENST00000551165 SCLT1Q96NL6 688 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 AP5M1Q9H0R1 490 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 CDC23Q9UJX2 597 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 DAAM1Q9Y4D1 1078 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 UMODL1Q5DID0 1318 aa21.24■□□□□ 0.99
SSH1-209ENST00000551165 PSEN2P49810 448 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 TAF3Q5VWG9 929 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 NOP9Q86U38 636 aaKnown RBP21.23■□□□□ 0.99
SSH1-209ENST00000551165 MAP7D2Q96T17 732 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 AGPAT1Q99943 283 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 MTMR12Q9C0I1 747 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 PDZD7Q9H5P4 517 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 SEPT11Q9NVA2 429 aaKnown RBP21.23■□□□□ 0.99
SSH1-209ENST00000551165 TRIP12Q14669 1992 aaPredicted RBP21.23■□□□□ 0.99
SSH1-209ENST00000551165 TOMM70O94826 608 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 NAP1L1P55209 391 aaKnown RBP21.23■□□□□ 0.99
SSH1-209ENST00000551165 RBM10P98175 930 aaKnown RBP21.23■□□□□ 0.99
SSH1-209ENST00000551165 FAM187BQ17R55 369 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 ERCC6LQ2NKX8 1250 aa21.23■□□□□ 0.99
SSH1-209ENST00000551165 HAS3O00219 553 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 NCK2O43639 380 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 CXCL8P10145 99 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 CHRNB2P17787 502 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 CPT1AP50416 773 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 FSCN1Q16658 493 aaKnown RBP21.22■□□□□ 0.99
SSH1-209ENST00000551165 VPS36Q86VN1 386 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 EFCAB13Q8IY85 973 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 EPS8L1Q8TE68 723 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 CAPNS2Q96L46 248 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 ADAMTS10Q9H324 1103 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 PUF60Q9UHX1 559 aaKnown RBP21.22■□□□□ 0.99
SSH1-209ENST00000551165 NOCTQ9UK39 431 aaKnown RBP21.22■□□□□ 0.99
SSH1-209ENST00000551165 NRCAMQ92823 1304 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 CEP350Q5VT06 3117 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 RRN3P2A6NIE6 340 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 TREHO43280 583 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 TSPAN1O60635 241 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 TACC1O75410 805 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 TNFAIP3P21580 790 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 ELF2Q15723 593 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 TRAPPC11Q7Z392 1133 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms