RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CAMKK1Q8N5S9 505 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 PIP4K2CQ8TBX8 421 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 PIGKQ92643 395 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 ZFP42Q96MM3 310 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 NLRP4Q96MN2 994 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 TTPALQ9BTX7 342 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 AVENQ9NQS1 362 aaPredicted RBP12.67□□□□□ -0.38
GPN3-208ENST00000550974 NRBP2Q9NSY0 501 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
GPN3-208ENST00000550974 SF3B1O75533 1304 aaKnown RBP eCLIP12.66□□□□□ -0.386e-10■■■■■ 187.2
GPN3-208ENST00000550974 A0A087WV48 116 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 MEIS1O00470 390 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 CAPN9O14815 690 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 DHX15O43143 795 aaKnown RBP12.66□□□□□ -0.38
GPN3-208ENST00000550974 ATG13O75143 517 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 OATP04181 439 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
GPN3-208ENST00000550974 OR1D2P34982 312 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 ZNF76P36508 570 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 PNPLA1Q8N8W4 532 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 ZSCAN18Q8TBC5 510 aaPredicted RBP12.66□□□□□ -0.38
GPN3-208ENST00000550974 ADAMTS14Q8WXS8 1223 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 NUSAP1Q9BXS6 441 aaKnown RBP12.66□□□□□ -0.38
GPN3-208ENST00000550974 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
GPN3-208ENST00000550974 ZNF197O14709 1029 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 CHADO15335 359 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 LRG1P02750 347 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 ENGP17813 658 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 MX1P20591 662 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 CCR2P41597 374 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 ABCG1P45844 678 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 CFHR1Q03591 330 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 RAB33AQ14088 237 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 PDZD4Q76G19 769 aaPredicted RBP12.65□□□□□ -0.38
GPN3-208ENST00000550974 ZNF410Q86VK4 478 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 HDDC3Q8N4P3 179 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 SMG8Q8ND04 991 aaKnown RBP12.65□□□□□ -0.38
GPN3-208ENST00000550974 CNNM3Q8NE01 707 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 YTHDC1Q96MU7 727 aaKnown RBP12.65□□□□□ -0.38
GPN3-208ENST00000550974 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 CNNM2Q9H8M5 875 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 GTSE1Q9NYZ3 720 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 MBD1Q9UIS9 605 aaPredicted RBP12.65□□□□□ -0.38
GPN3-208ENST00000550974 HES2Q9Y543 173 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 IPPQ9Y573 584 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
GPN3-208ENST00000550974 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 UPK3BL1B0FP48 263 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 UPK3BL2E5RIL1 263 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 MS4A1P11836 297 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 GJA1P17302 382 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 DHPSP49366 369 aaPredicted RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 DNM2P50570 870 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 PRKCEQ02156 737 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 CYP4F3Q08477 520 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 IMMTQ16891 758 aaKnown RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 ZNF746Q6NUN9 644 aaPredicted RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 RTL10Q7L3V2 364 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 TMEFF1Q8IYR6 380 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 LSM14AQ8ND56 463 aaKnown RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 PAAF1Q9BRP4 392 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 SNTG2Q9NY99 539 aa12.64□□□□□ -0.39
GPN3-208ENST00000550974 SUCLA2Q9P2R7 463 aaPredicted RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 EVLQ9UI08 416 aaPredicted RBP12.64□□□□□ -0.39
GPN3-208ENST00000550974 EML5Q05BV3 1969 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 IFIT3O14879 490 aaKnown RBP12.63□□□□□ -0.39
GPN3-208ENST00000550974 MICAL2O94851 1124 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 ATXN3P54252 364 aaPredicted RBP12.63□□□□□ -0.39
GPN3-208ENST00000550974 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
GPN3-208ENST00000550974 CYP4A22Q5TCH4 519 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 SCUBE3Q8IX30 993 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 RSPRY1Q96DX4 576 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 ZFYVE19Q96K21 471 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
GPN3-208ENST00000550974 HECTD1Q9ULT8 2610 aa12.63□□□□□ -0.39
GPN3-208ENST00000550974 PDCD11Q14690 1871 aaKnown RBP12.63□□□□□ -0.39
GPN3-208ENST00000550974 ASXL3Q9C0F0 2248 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 ERICH2A1L162 156 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 CAPN8A6NHC0 703 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
GPN3-208ENST00000550974 DGKEP52429 567 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
GPN3-208ENST00000550974 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
GPN3-208ENST00000550974 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms