RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 INPPL1O15357 1258 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 DDHD2O94830 711 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 SPAG1Q07617 926 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 NFKBIBQ15653 356 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 KLHL40Q2TBA0 621 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 ZNF280BQ86YH2 543 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 XXYLT1Q8NBI6 393 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 C17orf80Q9BSJ5 609 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 CWH43Q9H720 699 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 TRAF3IP3Q9Y228 551 aa18.73■□□□□ 0.59
BRF1-217ENST00000550375 SMIM28A0A1B0GU29 152 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 TRIM49BA6NDI0 452 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 PSMA7O14818 248 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 KIAA0391O15091 583 aaKnown RBP18.72■□□□□ 0.59
BRF1-217ENST00000550375 B4GALT3O60512 393 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 EXOC3O60645 756 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
BRF1-217ENST00000550375 NR3C1P04150 777 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 PBX3P40426 434 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 PPP2R3AQ06190 1150 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 GRIK3Q13003 919 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 ALKAL1Q6UXT8 129 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 RBM43Q6ZSC3 357 aaKnown RBP18.72■□□□□ 0.59
BRF1-217ENST00000550375 CBWD2Q8IUF1 395 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 C12orf56Q8IXR9 622 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 P2RX5Q93086 422 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 SYAP1Q96A49 352 aaPredicted RBP18.72■□□□□ 0.59
BRF1-217ENST00000550375 DHTKD1Q96HY7 919 aaPredicted RBP18.72■□□□□ 0.59
BRF1-217ENST00000550375 ZMAT2Q96NC0 199 aaKnown RBP18.72■□□□□ 0.59
BRF1-217ENST00000550375 TGS1Q96RS0 853 aaKnown RBP18.72■□□□□ 0.59
BRF1-217ENST00000550375 TSG101Q99816 390 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 NRDE2Q9H7Z3 1164 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 DNAJB4Q9UDY4 337 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 CTNND2Q9UQB3 1225 aa18.72■□□□□ 0.59
BRF1-217ENST00000550375 TTC26A0AVF1 554 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 THP07101 528 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 CTNNB1P35222 781 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 PPP1R2P41236 205 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 PMS1P54277 932 aaKnown RBP18.71■□□□□ 0.59
BRF1-217ENST00000550375 NLRP12P59046 1061 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 ANKRD40Q6AI12 368 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 CENPPQ6IPU0 288 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 RSPH1Q8WYR4 309 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 ZNF576Q9H609 170 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 PLEKHA5Q9HAU0 1116 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 RBAKQ9NYW8 714 aaPredicted RBP18.71■□□□□ 0.59
BRF1-217ENST00000550375 CNTN3Q9P232 1028 aa18.71■□□□□ 0.59
BRF1-217ENST00000550375 ZNF233A6NK53 670 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 ADRB2P07550 413 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 LINC00271P0C7V0 271 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 NR2F2P24468 414 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 CCNE1P24864 410 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 STX17P56962 302 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 SNRNP35Q16560 246 aaKnown RBP18.7■□□□□ 0.58
BRF1-217ENST00000550375 SKOR2Q2VWA4 1001 aaPredicted RBP18.7■□□□□ 0.58
BRF1-217ENST00000550375 DPCR1Q3MIW9 517 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 ZCWPW2Q504Y3 356 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 XKR4Q5GH76 650 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 CEP135Q66GS9 1140 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 BRSK2Q8IWQ3 736 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 COLGALT1Q8NBJ5 622 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 ARNTL2Q8WYA1 636 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 CLP1Q92989 425 aaKnown RBP18.7■□□□□ 0.58
BRF1-217ENST00000550375 PPP1R10Q96QC0 940 aaKnown RBP18.7■□□□□ 0.58
BRF1-217ENST00000550375 KIAA1586Q9HCI6 787 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 DMAC2Q9NW81 257 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 CACNG4Q9UBN1 327 aa18.7■□□□□ 0.58
BRF1-217ENST00000550375 NT5C1B-RDH14C9J2C7 533 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 KCNE1P15382 129 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 LAG3P18627 525 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 BMPR1AP36894 532 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 CASP4P49662 377 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 WNT7BP56706 349 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 BCAR1P56945 870 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 ERVK-21P61565 698 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 ADAM9Q13443 819 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 EPC2Q52LR7 807 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 JADE1Q6IE81 842 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 SASS6Q6UVJ0 657 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 KCNT2Q6UVM3 1135 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 SLC9A9Q8IVB4 645 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 CD302Q8IX05 232 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 MLKLQ8NB16 471 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 RABGGTAQ92696 567 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 C18orf25Q96B23 403 aaPredicted RBP18.69■□□□□ 0.58
BRF1-217ENST00000550375 KIF12Q96FN5 646 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 EEF2KMTQ96G04 330 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 FBXL18Q96ME1 805 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 FAM161BQ96MY7 647 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 ZNF558Q96NG5 402 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 TTYH1Q9H313 450 aaPredicted RBP18.69■□□□□ 0.58
BRF1-217ENST00000550375 AAASQ9NRG9 546 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 PCDHB12Q9Y5F1 795 aa18.69■□□□□ 0.58
BRF1-217ENST00000550375 CASTOR2A6NHX0 329 aa18.68■□□□□ 0.58
BRF1-217ENST00000550375 NFICP08651 508 aa18.68■□□□□ 0.58
BRF1-217ENST00000550375 RPL13P26373 211 aaKnown RBP18.68■□□□□ 0.58
BRF1-217ENST00000550375 OR1G1P47890 313 aa18.68■□□□□ 0.58
BRF1-217ENST00000550375 SLC11A1P49279 550 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms