RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ADAM28Q9UKQ2 775 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 HCFC2Q9Y5Z7 792 aa18.86■□□□□ 0.61
CHMP1A-208ENST00000550102 MUC3AQ02505 3323 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 MYMKA6NI61 221 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 CLASP2O75122 1294 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 EFEMP2O95967 443 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 PIGRP01833 764 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 GAP43P17677 238 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 ME1P48163 572 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 MCL1Q07820 350 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 NAB2Q15742 525 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 SMAD2Q15796 467 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 GLRA4Q5JXX5 417 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 CASP10Q92851 521 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 ZBTB45Q96K62 511 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 ACAP3Q96P50 834 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 PPP1R10Q96QC0 940 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 EMILIN2Q9BXX0 1053 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 PANK2Q9BZ23 570 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 CXCL16Q9H2A7 254 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 CUEDC2Q9H467 287 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 SSX2IPQ9Y2D8 614 aa18.85■□□□□ 0.61
CHMP1A-208ENST00000550102 MTCL1Q9Y4B5 1905 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 KIF4AO95239 1232 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 NMT1P30419 496 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 DNM1Q05193 864 aaKnown RBP18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 KIAA1841Q6NSI8 718 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 ANKRD54Q6NXT1 300 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 SHC4Q6S5L8 630 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 PPFIBP1Q86W92 1011 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 MAP4K3Q8IVH8 894 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 RABGGTAQ92696 567 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 HVCN1Q96D96 273 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 DNAJC19Q96DA6 116 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 UROC1Q96N76 676 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 FIZ1Q96SL8 496 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 PAAF1Q9BRP4 392 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 ST6GALNAC4Q9H4F1 302 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 SLC38A7Q9NVC3 462 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 PRKAG3Q9UGI9 489 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 DENND4AQ7Z401 1863 aa18.84■□□□□ 0.61
CHMP1A-208ENST00000550102 C2orf16Q68DN1 1984 aa18.83■□□□□ 0.61
CHMP1A-208ENST00000550102 C2CD2LO14523 706 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 TADA2AO75478 443 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 IDEP14735 1019 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 HOXB8P17481 243 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 GTF2BQ00403 316 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 KYAT1Q16773 422 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 TPRNQ4KMQ1 711 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 XKR4Q5GH76 650 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 HASPINQ8TF76 798 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 TNMDQ9H2S6 317 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 DZANK1Q9NVP4 752 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 CNTN3Q9P232 1028 aa18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 USP15Q9Y4E8 981 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-208ENST00000550102 SMIM28A0A1B0GU29 152 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 ADH1AP07327 375 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 CLTAP09496 248 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 CNPP09543 421 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 KCNE1P15382 129 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 DSG1Q02413 1049 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 CREMQ03060 361 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 ZP2Q05996 745 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 E2F4Q16254 413 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 USP41Q3LFD5 358 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 TAS1R1Q7RTX1 841 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 ADHFE1Q8IWW8 467 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 IQUBQ8NA54 791 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 DHX58Q96C10 678 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 GPR62Q9BZJ7 368 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 LRRC27Q9C0I9 530 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 MRPL44Q9H9J2 332 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 MAGEF1Q9HAY2 307 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 OLFML3Q9NRN5 406 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 PCDHA7Q9UN72 937 aa18.82■□□□□ 0.6
CHMP1A-208ENST00000550102 TMEM189-UBE2V1I3L0A0 370 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 LILRB3O75022 631 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 CXCL8P10145 99 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 KLRC2P26717 231 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 KRT85P78386 507 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 SEZ6Q53EL9 994 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 ZC2HC1CQ53FD0 456 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 GPR65Q8IYL9 337 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 SLC22A17Q8WUG5 538 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 KLHL5Q96PQ7 755 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 HAPLN2Q9GZV7 340 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 CHST7Q9NS84 486 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 KBTBD4Q9NVX7 518 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 FAM13BQ9NYF5 915 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 RCOR1Q9UKL0 485 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 ZDHHC9Q9Y397 364 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 ATP6V1DQ9Y5K8 247 aa18.81■□□□□ 0.6
CHMP1A-208ENST00000550102 A0A0B4J269 797 aa18.8■□□□□ 0.6
CHMP1A-208ENST00000550102 FRMD3A2A2Y4 597 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms