RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, human

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-206	ENST00000549842	ITGB3	P05106	788 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	ETV4	P43268	484 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PRIM2	P49643	509 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	HK3	P52790	923 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PPP2CB	P62714	309 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PPP2CA	P67775	309 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	MAP3K12	Q12852	859 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	FGL2	Q14314	439 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	EIF4H	Q15056	248 aa	Known RBP	5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	DGKD	Q16760	1214 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	ZNF827	Q17R98	1081 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PRR16	Q569H4	304 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PHF19	Q5T6S3	580 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	IZUMO3	Q5VZ72	239 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	SWSAP1	Q6NVH7	229 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	APOA5	Q6Q788	366 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	OR2C3	Q8N628	320 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PAF1	Q8N7H5	531 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	C3orf20	Q8ND61	904 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	MTFMT	Q96DP5	389 aa	Known RBP	5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	FAM167A	Q96KS9	214 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	CARD11	Q9BXL7	1154 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	WDR12	Q9GZL7	423 aa	Known RBP	5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	SEC61A2	Q9H9S3	476 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	KIAA1586	Q9HCI6	787 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	DMRT3	Q9NQL9	472 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PADI4	Q9UM07	663 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	PCDHA13	Q9Y5I0	950 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	SLC4A7	Q9Y6M7	1214 aa		5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.22	□□□□□ -1.57
CPNE8-206	ENST00000549842	hCG_1642624	A0A1W2PR95	340 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	LAMTOR5	O43504	91 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	SEC24D	O94855	1032 aa	Predicted RBP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	ENDOD1	O94919	500 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	CD53	P19397	219 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	CASP5	P51878	434 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	RAB1A	P62820	205 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	MEF2A	Q02078	507 aa	Predicted RBP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	MGAT5	Q09328	741 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	USP10	Q14694	798 aa	Known RBP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	MAN2A1	Q16706	1144 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	WDR72	Q3MJ13	1102 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	TMEM200B	Q69YZ2	307 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	TRIM68	Q6AZZ1	485 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	RHOT1	Q8IXI2	618 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	NKAP	Q8N5F7	415 aa	Known RBP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	SPATA5	Q8NB90	893 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	OR2I1P	Q8NGU4	316 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	CRB3	Q9BUF7	120 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	C22orf23	Q9BZE7	217 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	HAPLN2	Q9GZV7	340 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	VPS11	Q9H270	941 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	MSL2	Q9HCI7	577 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	STARD7	Q9NQZ5	370 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	SNX13	Q9Y5W8	968 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842	RPTOR	Q8N122	1335 aa		5.21	□□□□□ -1.58
CPNE8-206	ENST00000549842		H3BUI4	141 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	PHGDH	O43175	533 aa	Known RBP	5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	AKR1B10	O60218	316 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	PHF2	O75151	1096 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	TNFSF4	P23510	183 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	NKX6-1	P78426	367 aa	Predicted RBP	5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	NOG	Q13253	232 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	BIRC3	Q13489	604 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	TRIM14	Q14142	442 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	ALF	Q53S48	1182 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	RALYL	Q86SE5	291 aa	Known RBP	5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	TTC9B	Q8N6N2	239 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	OR5AN1	Q8NGI8	311 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	PLBD2	Q8NHP8	589 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	PPP1R14C	Q8TAE6	165 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	DYDC2	Q96IM9	177 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	ZC3H10	Q96K80	434 aa	Known RBP	5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	CLPTM1L	Q96KA5	538 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	OSBPL6	Q9BZF3	934 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	MANSC1	Q9H8J5	431 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	ARMT1	Q9H993	441 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	ATP6V0A4	Q9HBG4	840 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	LMBRD1	Q9NUN5	540 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	TDP1	Q9NUW8	608 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	GTF2A1L	Q9UNN4	478 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842	ZDHHC9	Q9Y397	364 aa		5.2	□□□□□ -1.58
CPNE8-206	ENST00000549842		A0A0A6YYK5	440 aa	Predicted RBP	5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842		A0A0G2JNJ9	132 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	ISM1	B1AKI9	464 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842		B8ZZF3	427 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	PRRG2	O14669	202 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	KPNA5	O15131	536 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	FSBP	O95073	299 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	LTA4H	P09960	611 aa	Known RBP	5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	CTSS	P25774	331 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	PPM1A	P35813	382 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	STT3A	P46977	705 aa		5.19	□□□□□ -1.58
CPNE8-206	ENST00000549842	CCT5	P48643	541 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms