RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 FNDC1Q4ZHG4 1894 aaPredicted RBP23.04■■□□□ 1.28
VPS29-206ENST00000549578 TTC26A0AVF1 554 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 ZNF233A6NK53 670 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 CETN3O15182 167 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 SCNN1GP51170 649 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 WNT7BP56706 349 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 CT47A1Q5JQC4 288 aaPredicted RBP23.04■■□□□ 1.28
VPS29-206ENST00000549578 GLRA4Q5JXX5 417 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 PRPF38BQ5VTL8 546 aaKnown RBP23.04■■□□□ 1.28
VPS29-206ENST00000549578 FOXR2Q6PJQ5 311 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 ALKAL1Q6UXT8 129 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 BRSK2Q8IWQ3 736 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 GSTCDQ8NEC7 633 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 ZNF689Q96CS4 500 aaPredicted RBP23.04■■□□□ 1.28
VPS29-206ENST00000549578 RPS6KC1Q96S38 1066 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 TMEM117Q9H0C3 514 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 MIOSQ9NXC5 875 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 PLAGL2Q9UPG8 496 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 COLQQ9Y215 455 aaPredicted RBP23.04■■□□□ 1.28
VPS29-206ENST00000549578 FRMD4BQ9Y2L6 1034 aa23.04■■□□□ 1.28
VPS29-206ENST00000549578 LACTBL1A8MY62 500 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 PTGESO14684 152 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 TLL1O43897 1013 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 POMCP01189 267 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 HTRA4P83105 476 aaPredicted RBP23.03■■□□□ 1.28
VPS29-206ENST00000549578 PPP2R3AQ06190 1150 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 SPAG1Q07617 926 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 NOMO2Q5JPE7 1267 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 RALGAPA2Q2PPJ7 1873 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 ANK1P16157 1881 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 CYP24A1Q07973 514 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 XKR4Q5GH76 650 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 URGCPQ8TCY9 931 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 ZMAT2Q96NC0 199 aaKnown RBP23.03■■□□□ 1.28
VPS29-206ENST00000549578 RAD9AQ99638 391 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 SRRTQ9BXP5 876 aaKnown RBP23.03■■□□□ 1.28
VPS29-206ENST00000549578 PLEKHA5Q9HAU0 1116 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 PDE11AQ9HCR9 933 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 CNTN3Q9P232 1028 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 HCSTQ9UBK5 93 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 INSL6Q9Y581 213 aa23.03■■□□□ 1.28
VPS29-206ENST00000549578 INPPL1O15357 1258 aa23.02■■□□□ 1.28
VPS29-206ENST00000549578 MYOGP15173 224 aa23.02■■□□□ 1.28
VPS29-206ENST00000549578 POU5F1Q01860 360 aaKnown RBP23.02■■□□□ 1.28
VPS29-206ENST00000549578 FAM186BQ8IYM0 893 aa23.02■■□□□ 1.28
VPS29-206ENST00000549578 CEP63Q96MT8 703 aa23.02■■□□□ 1.28
VPS29-206ENST00000549578 TBC1D13Q9NVG8 400 aa23.02■■□□□ 1.28
VPS29-206ENST00000549578 GBF1Q92538 1859 aa23.01■■□□□ 1.27
VPS29-206ENST00000549578 SMIM28A0A1B0GU29 152 aa23.01■■□□□ 1.27
VPS29-206ENST00000549578 LCHNA4D1U4 455 aa23.01■■□□□ 1.27
VPS29-206ENST00000549578 PSMC2P35998 433 aaKnown RBP23.01■■□□□ 1.27
VPS29-206ENST00000549578 BTG3Q14201 252 aaPredicted RBP23.01■■□□□ 1.27
VPS29-206ENST00000549578 HSP90AA2PQ14568 343 aaPredicted RBP23.01■■□□□ 1.27
VPS29-206ENST00000549578 TPD52L1Q16890 204 aaPredicted RBP23.01■■□□□ 1.27
VPS29-206ENST00000549578 CCDC127Q96BQ5 260 aa23.01■■□□□ 1.27
VPS29-206ENST00000549578 MFSD14AQ96MC6 490 aa23.01■■□□□ 1.27
VPS29-206ENST00000549578 NAT10Q9H0A0 1025 aaKnown RBP23.01■■□□□ 1.27
VPS29-206ENST00000549578 HSFX4A0A1B0GTS1 333 aaPredicted RBP23■■□□□ 1.27
VPS29-206ENST00000549578 HSFX3A0A1B0GWH4 333 aaPredicted RBP23■■□□□ 1.27
VPS29-206ENST00000549578 IL18RAPO95256 599 aa23■■□□□ 1.27
VPS29-206ENST00000549578 NFICP08651 508 aa23■■□□□ 1.27
VPS29-206ENST00000549578 EPB41P11171 864 aaKnown RBP23■■□□□ 1.27
VPS29-206ENST00000549578 KCNE1P15382 129 aa23■■□□□ 1.27
VPS29-206ENST00000549578 PBX2P40425 430 aa23■■□□□ 1.27
VPS29-206ENST00000549578 JADE1Q6IE81 842 aa23■■□□□ 1.27
VPS29-206ENST00000549578 LRSAM1Q6UWE0 723 aa23■■□□□ 1.27
VPS29-206ENST00000549578 CMTR2Q8IYT2 770 aaKnown RBP23■■□□□ 1.27
VPS29-206ENST00000549578 LRRC43Q8N309 656 aa23■■□□□ 1.27
VPS29-206ENST00000549578 ENOX1Q8TC92 643 aaKnown RBP23■■□□□ 1.27
VPS29-206ENST00000549578 PLEKHO2Q8TD55 490 aa23■■□□□ 1.27
VPS29-206ENST00000549578 KIF12Q96FN5 646 aa23■■□□□ 1.27
VPS29-206ENST00000549578 FAM84AQ96KN4 292 aa23■■□□□ 1.27
VPS29-206ENST00000549578 MKNK1Q9BUB5 465 aa23■■□□□ 1.27
VPS29-206ENST00000549578 ASB7Q9H672 318 aa23■■□□□ 1.27
VPS29-206ENST00000549578 TDRD15B5MCY1 1934 aaKnown RBP23■■□□□ 1.27
VPS29-206ENST00000549578 SLC16A3O15427 465 aaKnown RBP22.99■■□□□ 1.27
VPS29-206ENST00000549578 THP07101 528 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 ZNF165P49910 485 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 RNASELQ05823 741 aaKnown RBP22.99■■□□□ 1.27
VPS29-206ENST00000549578 GRIK3Q13003 919 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 PSMD6Q15008 389 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 SPATA1Q5VX52 437 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 FILIP1Q7Z7B0 1213 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 ZNF280BQ86YH2 543 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 CD302Q8IX05 232 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 EFCAB13Q8IY85 973 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 PPP1R10Q96QC0 940 aaKnown RBP22.99■■□□□ 1.27
VPS29-206ENST00000549578 MRPL9Q9BYD2 267 aaKnown RBP22.99■■□□□ 1.27
VPS29-206ENST00000549578 KANSL3Q9P2N6 904 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 NFE2L3Q9Y4A8 694 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 PDCD11Q14690 1871 aaKnown RBP22.99■■□□□ 1.27
VPS29-206ENST00000549578 PTPRJQ12913 1337 aa22.99■■□□□ 1.27
VPS29-206ENST00000549578 MAPK13O15264 365 aa22.98■■□□□ 1.27
VPS29-206ENST00000549578 B4GALT3O60512 393 aa22.98■■□□□ 1.27
VPS29-206ENST00000549578 DLATP10515 647 aaKnown RBP22.98■■□□□ 1.27
VPS29-206ENST00000549578 MYL5Q02045 173 aa22.98■■□□□ 1.27
VPS29-206ENST00000549578 HSP90AA4PQ58FG1 418 aa22.98■■□□□ 1.27
VPS29-206ENST00000549578 LMBRD2Q68DH5 695 aaPredicted RBP22.98■■□□□ 1.27
VPS29-206ENST00000549578 TMEM130Q8N3G9 435 aa22.98■■□□□ 1.27
VPS29-206ENST00000549578 AOPEPQ8N6M6 819 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms