RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RNF43Q68DV7 783 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 MIS18BP1Q6P0N0 1132 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 DCAF4Q8WV16 495 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 C7orf43Q8WVR3 580 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
HDAC7-228ENST00000548938 ZNF653Q96CK0 615 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 MAGEB18Q96M61 343 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 WDR18Q9BV38 432 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 TRIM7Q9C029 511 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 NINJ2Q9NZG7 142 aa14.67□□□□□ -0.06
HDAC7-228ENST00000548938 WRAP73Q9P2S5 460 aaPredicted RBP14.67□□□□□ -0.06
HDAC7-228ENST00000548938 IGLV3-22A0A075B6J6 115 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 G3V3G9 751 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 TAC1P20366 129 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 IVDP26440 423 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 SCNN1DP51172 638 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 IRX1P78414 480 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-228ENST00000548938 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 FBXO11Q86XK2 927 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 MORC4Q8TE76 937 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 SNF8Q96H20 258 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 NKX1-2Q9UD57 310 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-228ENST00000548938 FOSP01100 380 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-228ENST00000548938 HLA-DOAP06340 250 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
HDAC7-228ENST00000548938 IKQ13123 557 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-228ENST00000548938 BLMHQ13867 455 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 TAF11Q15544 211 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 STXBP4Q6ZWJ1 553 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 OTOP1Q7RTM1 612 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 PRUNE1Q86TP1 453 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 SLC47A2Q86VL8 602 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 KIAA0825Q8IV33 1275 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 ZFPM1Q8IX07 1006 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 SLC17A8Q8NDX2 589 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 SLCO2A1Q92959 643 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 HERPUD2Q9BSE4 406 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 MYLK2Q9H1R3 596 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 KIF9Q9HAQ2 790 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 TUFT1Q9NNX1 390 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 NKIRAS1Q9NYS0 192 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 SEL1LQ9UBV2 794 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 ADGRA3Q8IWK6 1321 aa14.66□□□□□ -0.06
HDAC7-228ENST00000548938 CYP26A1O43174 497 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 ITIH2P19823 946 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 SKIV2L2P42285 1042 aaKnown RBP14.65□□□□□ -0.06
HDAC7-228ENST00000548938 EPC2Q52LR7 807 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 FBF1Q8TES7 1133 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 TMEM237Q96Q45 408 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 SLX4Q8IY92 1834 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 FSCN2O14926 492 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 CCNG1P51959 295 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 FMO1Q01740 532 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 RNASELQ05823 741 aaKnown RBP14.65□□□□□ -0.06
HDAC7-228ENST00000548938 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 ARHGEF18Q6ZSZ5 1173 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 PODNQ7Z5L7 613 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 SLC9A9Q8IVB4 645 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 ERP27Q96DN0 273 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 PITPNM3Q9BZ71 974 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 NAALADL1Q9UQQ1 740 aa14.65□□□□□ -0.06
HDAC7-228ENST00000548938 WFS1O76024 890 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 CYP1A2P05177 515 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 VAMP7P51809 220 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 STRN3Q13033 797 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 C1orf220Q5T0J3 134 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 INTS8Q75QN2 995 aaKnown RBP14.65□□□□□ -0.07
HDAC7-228ENST00000548938 ARMC2Q8NEN0 867 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 ZNF483Q8TF39 744 aaPredicted RBP14.65□□□□□ -0.07
HDAC7-228ENST00000548938 SPOCK2Q92563 424 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 PAIP2Q9BPZ3 127 aaKnown RBP14.65□□□□□ -0.07
HDAC7-228ENST00000548938 LGALS13Q9UHV8 139 aa14.65□□□□□ -0.07
HDAC7-228ENST00000548938 CORO1CQ9ULV4 474 aaPredicted RBP14.65□□□□□ -0.07
HDAC7-228ENST00000548938 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.65□□□□□ -0.07
HDAC7-228ENST00000548938 ADAMTSL1Q8N6G6 1762 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 EME2A4GXA9 379 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 UPP2O95045 317 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 GZMAP12544 262 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 TARSP26639 723 aaKnown RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 WDR4P57081 412 aaKnown RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 CCDC15Q0P6D6 951 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 ACVR2BQ13705 512 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 PTK6Q13882 451 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 SYDE2Q5VT97 1194 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 TRIM68Q6AZZ1 485 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 PLEKHO2Q8TD55 490 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 C9orf72Q96LT7 481 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 KREMEN1Q96MU8 473 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 RAB3IPQ96QF0 476 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 CBWD1Q9BRT8 395 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 TXLNGQ9NUQ3 528 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 GTF3C4Q9UKN8 822 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 ZMYND8Q9ULU4 1186 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-228ENST00000548938 K7ENM7 598 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 HIP1RO75146 1068 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 PSMD10O75832 226 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 ATF2P15336 505 aa14.64□□□□□ -0.07
HDAC7-228ENST00000548938 CETN1Q12798 172 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms