RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CLEC16AQ2KHT3 1053 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 ZNF516Q92618 1163 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 FAM81BQ96LP2 452 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 ZDHHC18Q9NUE0 388 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 PCYOX1Q9UHG3 505 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 RASAL2Q9UJF2 1139 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 PCDHA3Q9Y5H8 950 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 POLR2AP24928 1970 aaKnown RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 PPFIA2O75334 1257 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 ATP4AP20648 1035 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 DRG2P55039 364 aaKnown RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 RUFY4Q6ZNE9 571 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 CYFIP1Q7L576 1253 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 CPNE8Q86YQ8 564 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 ZDHHC14Q8IZN3 488 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 TRPM4Q8TD43 1214 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 ZNF526Q8TF50 670 aaPredicted RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 FAM84AQ96KN4 292 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 TXLNGYQ9BZA5 131 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 CENPHQ9H3R5 247 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 MAFBQ9Y5Q3 323 aaPredicted RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 SSC5DA1L4H1 1573 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 MYO1FO00160 1098 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 ICAM3P32942 547 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 PTGIRP43119 386 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 STRN3Q13033 797 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 BIRC3Q13489 604 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 PSMD6Q15008 389 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 STXBP2Q15833 593 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 SPDYCQ5MJ68 293 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 NOL9Q5SY16 702 aaKnown RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 PSPC1Q8WXF1 523 aaKnown RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 KCNN1Q92952 543 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 MAGOHBQ96A72 148 aaKnown RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 ZNF302Q9NR11 478 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 CNOT8Q9UFF9 292 aaKnown RBP16.65■□□□□ 0.26
BRF1-212ENST00000547562 STYXL1Q9Y6J8 313 aa16.65■□□□□ 0.26
BRF1-212ENST00000547562 UTRNP46939 3433 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 KIAA0391O15091 583 aaKnown RBP16.64■□□□□ 0.25
BRF1-212ENST00000547562 ATG7O95352 703 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 OATP04181 439 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 CCT5P48643 541 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 SKIDA1Q1XH10 827 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 ZACNQ401N2 412 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 DNERQ8NFT8 737 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 TMEM143Q96AN5 459 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 FNBP1Q96RU3 617 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 MTFR1LQ9H019 292 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 PORCNQ9H237 461 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 GGA3Q9NZ52 723 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 PTPRFP10586 1907 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 ERLIN2O94905 339 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 UNGP13051 313 aaPredicted RBP16.64■□□□□ 0.25
BRF1-212ENST00000547562 GUCY1A3Q02108 690 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 LMBRD2Q68DH5 695 aaPredicted RBP16.64■□□□□ 0.25
BRF1-212ENST00000547562 TTC27Q6P3X3 843 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 SLC13A5Q86YT5 568 aaPredicted RBP16.64■□□□□ 0.25
BRF1-212ENST00000547562 DHX33Q9H6R0 707 aaKnown RBP16.64■□□□□ 0.25
BRF1-212ENST00000547562 AGO2Q9UKV8 859 aaKnown RBP16.64■□□□□ 0.25
BRF1-212ENST00000547562 ATP8A1Q9Y2Q0 1164 aa16.64■□□□□ 0.25
BRF1-212ENST00000547562 PODXLO00592 558 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 CALCAP01258 141 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 TNNI1P19237 187 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 SCP2P22307 547 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 LSP1P33241 339 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 WNT7BP56706 349 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 RWDD2BP57060 319 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 NLRP11P59045 1033 aaKnown RBP16.63■□□□□ 0.25
BRF1-212ENST00000547562 CYP1B1Q16678 543 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 WDR44Q5JSH3 913 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 CCDC137Q6PK04 289 aaKnown RBP16.63■□□□□ 0.25
BRF1-212ENST00000547562 CHST13Q8NET6 341 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 ASAP3Q8TDY4 903 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 RABEP2Q9H5N1 569 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 SNX24Q9Y343 169 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 PCDHB2Q9Y5E7 798 aa16.63■□□□□ 0.25
BRF1-212ENST00000547562 TCRBV7S2A1N4TA0A589 114 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 ZEB2O60315 1214 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 HLA-DRAP01903 254 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 GLRA2P23416 452 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 MDH1P40925 334 aaKnown RBP16.62■□□□□ 0.25
BRF1-212ENST00000547562 NAMPTP43490 491 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 ACOT2P49753 483 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 CNTN2Q02246 1040 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 FSTL1Q12841 308 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 TDRD10Q5VZ19 366 aaKnown RBP16.62■□□□□ 0.25
BRF1-212ENST00000547562 ZDHHC24Q6UX98 284 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 ZNF677Q86XU0 584 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 ARFGAP2Q8N6H7 521 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 PPP2R3BQ9Y5P8 575 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 PIGRP01833 764 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 C4BPAP04003 597 aaKnown RBP16.62■□□□□ 0.25
BRF1-212ENST00000547562 HPDP32754 393 aaPredicted RBP16.62■□□□□ 0.25
BRF1-212ENST00000547562 PLTPP55058 493 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 SIX1Q15475 284 aaPredicted RBP16.62■□□□□ 0.25
BRF1-212ENST00000547562 SH3D19Q5HYK7 790 aa16.62■□□□□ 0.25
BRF1-212ENST00000547562 AGBL2Q5U5Z8 902 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms