RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 AGPAT3Q9NRZ7 376 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 PCDHA2Q9Y5H9 948 aa15.65■□□□□ 0.1
HOXC11-202ENST00000546378 CCDC195A0A1B0GUA6 201 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 SMIM24O75264 130 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 MXI1P50539 228 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 AGBL2Q5U5Z8 902 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 HES6Q96HZ4 224 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 LXNQ9BS40 222 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 DNAJC18Q9H819 358 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 NKX1-2Q9UD57 310 aaPredicted RBP15.64■□□□□ 0.09
HOXC11-202ENST00000546378 BAG2O95816 211 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 GPC5P78333 572 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 FASTKD3Q14CZ7 662 aaKnown RBP15.64■□□□□ 0.09
HOXC11-202ENST00000546378 SETDB1Q15047 1291 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 ABCB5Q2M3G0 1257 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 MUM1Q2TAK8 710 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 DUPD1Q68J44 220 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 NOP9Q86U38 636 aaKnown RBP15.64■□□□□ 0.09
HOXC11-202ENST00000546378 TEX2Q8IWB9 1127 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 CD302Q8IX05 232 aa15.64■□□□□ 0.09
HOXC11-202ENST00000546378 CNOT10Q9H9A5 744 aaKnown RBP15.64■□□□□ 0.09
HOXC11-202ENST00000546378 METTL14Q9HCE5 456 aaKnown RBP15.64■□□□□ 0.09
HOXC11-202ENST00000546378 MEIS2O14770 477 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 CETPP11597 493 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 CHRNB2P17787 502 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 COILP38432 576 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 MXRA7P84157 204 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 CYFIP1Q7L576 1253 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 ACER1Q8TDN7 264 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 NUDCD1Q96RS6 583 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 UBN1Q9NPG3 1134 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 TMEM59LQ9UK28 342 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 SNX3O60493 162 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 PHF2O75151 1096 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 RALAP11233 206 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 EIF2AK2P19525 551 aaKnown RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 SMTNL2Q2TAL5 461 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 HHATQ5VTY9 493 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 EPM2AIP1Q7L775 607 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 ATXN2LQ8WWM7 1075 aaKnown RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 POMGNT1Q8WZA1 660 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 STK33Q9BYT3 514 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 ADAM7Q9H2U9 754 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 ZNF70Q9UC06 446 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 TESPA1A2RU30 521 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 PDXKO00764 312 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 NDUFB10O96000 172 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 TNNI1P19237 187 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 ADCY2Q08462 1091 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 EML3Q32P44 896 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 ZNF570Q96NI8 536 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 GRHL1Q9NZI5 618 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 MAGED2Q9UNF1 606 aaPredicted RBP15.63■□□□□ 0.09
HOXC11-202ENST00000546378 FZD1Q9UP38 647 aa15.63■□□□□ 0.09
HOXC11-202ENST00000546378 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ZBED4O75132 1171 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 CYP3A4P08684 503 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ATP2A2P16615 1042 aaKnown RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 TNFRSF8P28908 595 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SARNPP82979 210 aaKnown RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ORC1Q13415 861 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 BZW1Q7L1Q6 419 aaKnown RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ZNF572Q7Z3I7 529 aaPredicted RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SLFN12Q8IYM2 578 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SYT2Q8N9I0 419 aaPredicted RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 EPB41L4BQ9H329 900 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 C15orf41Q9Y2V0 281 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 DOCK2Q92608 1830 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 hCG_2014768A0A024R1R8 64 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 COPS2P61201 443 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 TGFB2P61812 414 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 GABPAQ06546 454 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ANKRD20A2Q5SQ80 823 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ANKRD20A1Q5TYW2 823 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ANKRD20A3Q5VUR7 823 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ZBED8Q8IZ13 594 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SLC25A41Q8N5S1 370 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ZNF317Q96PQ6 595 aaPredicted RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ZSWIM1Q9BR11 485 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 HERPUD2Q9BSE4 406 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 CASZ1Q86V15 1759 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 NFKBIEO00221 500 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 PLS3P13797 630 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 PIK3CAP42336 1068 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 VAMP7P51809 220 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 BFSP1Q12934 665 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 P3H1Q32P28 736 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SLC13A5Q86YT5 568 aaPredicted RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 CCDC125Q86Z20 511 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 GLIS1Q8NBF1 620 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 SYN2Q92777 582 aaPredicted RBP15.62■□□□□ 0.09
HOXC11-202ENST00000546378 EDEM3Q9BZQ6 932 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ARMCX1Q9P291 453 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 NAALADL1Q9UQQ1 740 aa15.62■□□□□ 0.09
HOXC11-202ENST00000546378 ASTN2O75129 1339 aaPredicted RBP15.61■□□□□ 0.09
HOXC11-202ENST00000546378 RRM1P23921 792 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms