RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CYP4F11Q9HBI6 524 aa12.94□□□□□ -0.34
NPC1L1-204ENST00000546276 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 FAM237AA0A1B0GTK4 181 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 ENO4A6NNW6 628 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 EEF1B2P24534 225 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 BCAR1P56945 870 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 ZC2HC1CQ53FD0 456 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC27A3Q5K4L6 730 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 BTBD6Q96KE9 485 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 NLRP4Q96MN2 994 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 GCOM2Q9BZD3 368 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 GABBR1Q9UBS5 961 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC37A4O43826 429 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 PON1P27169 355 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 HIC1Q14526 733 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC13A5Q86YT5 568 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 SIX6OS1Q8N1H7 587 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 TMEM117Q9H0C3 514 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 RBAKQ9NYW8 714 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 RAD17O75943 681 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 PPM1FP49593 454 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 NPEPPSP55786 919 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 SATB1Q01826 763 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 MAPK6Q16659 721 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 TRIM15Q9C019 465 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 POLR3FQ9H1D9 316 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 KDM4CQ9H3R0 1056 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 JMJD4Q9H9V9 463 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
NPC1L1-204ENST00000546276 ARHGAP10A1A4S6 786 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 P4HA2O15460 535 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 ASAP2O43150 1006 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 NQO1P15559 274 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CASP2P42575 452 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CLEC10AQ8IUN9 316 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 KCTD17Q8N5Z5 321 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 NRBF2Q96F24 287 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MTRQ99707 1265 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 OSBPL8Q9BZF1 889 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 THAP2Q9H0W7 228 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 GEMIN8Q9NWZ8 242 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 ZHX2Q9Y6X8 837 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 PPLO60437 1756 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 GNGT2O14610 69 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 ENO1P06733 434 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 OCRLQ01968 901 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CENPCQ03188 943 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 KDSRQ06136 332 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 DNAL1Q4LDG9 190 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 KLC3Q6P597 504 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CXorf38Q8TB03 319 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MRPL46Q9H2W6 279 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 NTSR2O95665 410 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CYP11B2P19099 503 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 SDC4P31431 198 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CRYMQ14894 314 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 RABGAP1LQ5R372 815 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 TMEM154Q6P9G4 183 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 EPS8L3Q8TE67 593 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MRPL40Q9NQ50 206 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 PALM3A6NDB9 673 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CAND2O75155 1236 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 YWHABP31946 246 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 GPC3P51654 580 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 EIF3EP60228 445 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 BIRC2Q13490 618 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 HDAC7Q8WUI4 952 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 SENP7Q9BQF6 1050 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 KLHL8Q9P2G9 620 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 TRAF3IP3Q9Y228 551 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 MYOM1P52179 1685 aa12.92□□□□□ -0.34
NPC1L1-204ENST00000546276 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 A0A087X0B3 334 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 M0QYV0 167 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 STMN1P16949 149 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms