RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ZNF528Q3MIS6 628 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 PPM1LQ5SGD2 360 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 MTSS1LQ765P7 747 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 KIAA2013Q8IYS2 634 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 HASPINQ8TF76 798 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 WASF1Q92558 559 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 RUBCNQ92622 972 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 PDZD7Q9H5P4 517 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 ORC3Q9UBD5 711 aaPredicted RBP18.45■□□□□ 0.54
CPSF7-225ENST00000545934 MED19A0JLT2 244 aaPredicted RBP18.44■□□□□ 0.54
CPSF7-225ENST00000545934 LRRIQ4A6NIV6 560 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 USO1O60763 962 aaKnown RBP18.44■□□□□ 0.54
CPSF7-225ENST00000545934 THP07101 528 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 PRKCQQ04759 706 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 RAB33AQ14088 237 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 LIN9Q5TKA1 542 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 ITFG1Q8TB96 612 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 OSBPL6Q9BZF3 934 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 CCDC113Q9H0I3 377 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 SNTG2Q9NY99 539 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 DLL3Q9NYJ7 618 aa18.44■□□□□ 0.54
CPSF7-225ENST00000545934 TICRRQ7Z2Z1 1910 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 TMEM189-UBE2V1I3L0A0 370 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 N4BP3O15049 544 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 NEMFO60524 1076 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 RECQL4O94761 1208 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 EDN1P05305 212 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 FGFR3P22607 806 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 TXKP42681 527 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 ELAVL2Q12926 359 aaKnown RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 SNW1Q13573 536 aaKnown RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 UVSSAQ2YD98 709 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 RSPO2Q6UXX9 243 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 MCPH1Q8NEM0 835 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 BORCS6Q96GS4 357 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 CCDC43Q96MW1 224 aaKnown RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 FBXO4Q9UKT5 387 aa18.43■□□□□ 0.54
CPSF7-225ENST00000545934 MTF2Q9Y483 593 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-225ENST00000545934 CCL16O15467 120 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 XYLBO75191 536 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 PUM1Q14671 1186 aaKnown RBP eCLIP18.42■□□□□ 0.54
CPSF7-225ENST00000545934 SLC44A4Q53GD3 710 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 AXDND1Q5T1B0 1012 aaPredicted RBP18.42■□□□□ 0.54
CPSF7-225ENST00000545934 CD300LGQ6UXG3 332 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 RTL10Q7L3V2 364 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 CATSPER3Q86XQ3 398 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 CEP57Q86XR8 500 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 ZBTB8OSQ8IWT0 167 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 NPAS3Q8IXF0 933 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 DCLK2Q8N568 766 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 SLC7A14Q8TBB6 771 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 BSNDQ8WZ55 320 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 C2orf40Q9H1Z8 148 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 TUFT1Q9NNX1 390 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 HCFC1R1Q9NWW0 138 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 DNMT3BQ9UBC3 853 aaKnown RBP18.42■□□□□ 0.54
CPSF7-225ENST00000545934 MTRRQ9UBK8 725 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 KCNH3Q9ULD8 1083 aa18.42■□□□□ 0.54
CPSF7-225ENST00000545934 BTBD18B2RXH4 712 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 ACKR2O00590 384 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 IGFBP6P24592 240 aaPredicted RBP18.41■□□□□ 0.54
CPSF7-225ENST00000545934 MAGEA9P43362 315 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
CPSF7-225ENST00000545934 PRPF4BQ13523 1007 aaKnown RBP18.41■□□□□ 0.54
CPSF7-225ENST00000545934 MAEAQ7L5Y9 396 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 DGLUCYQ7Z3D6 616 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 NELL1Q92832 810 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 BCO2Q9BYV7 579 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 TMEM60Q9H2L4 133 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 BRMS1Q9HCU9 246 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
CPSF7-225ENST00000545934 MYH11P35749 1972 aa18.41■□□□□ 0.54
CPSF7-225ENST00000545934 CEP250Q9BV73 2442 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 KINO60870 393 aaKnown RBP18.4■□□□□ 0.54
CPSF7-225ENST00000545934 MED24O75448 989 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 OR1D2P34982 312 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 PFKPQ01813 784 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 EEF1DP3Q658K8 133 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 POTEHQ6S545 545 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 CLDN23Q96B33 292 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 PPP1R10Q96QC0 940 aaKnown RBP18.4■□□□□ 0.54
CPSF7-225ENST00000545934 KXD1Q9BQD3 176 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 POLR3CQ9BUI4 534 aaPredicted RBP18.4■□□□□ 0.54
CPSF7-225ENST00000545934 LTB4R2Q9NPC1 389 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 AVENQ9NQS1 362 aaPredicted RBP18.4■□□□□ 0.54
CPSF7-225ENST00000545934 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 BACE2Q9Y5Z0 518 aa18.4■□□□□ 0.54
CPSF7-225ENST00000545934 SHISA7A6NL88 538 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 SPTLC1O15269 473 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 ECI2O75521 394 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 PRKCBP05771 671 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 ATP2B1P20020 1258 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 NAMPTP43490 491 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 MAPK6Q16659 721 aa18.39■□□□□ 0.53
CPSF7-225ENST00000545934 PABPC1LQ4VXU2 614 aaKnown RBP18.39■□□□□ 0.53
CPSF7-225ENST00000545934 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms